FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627706_a_at:

>probe:Drosophila_2:1627706_a_at:79:269; Interrogation_Position=2216; Antisense; CAGGAGGTCTGCTCAGTATGCCAGC
>probe:Drosophila_2:1627706_a_at:202:485; Interrogation_Position=2231; Antisense; GTATGCCAGCCGTGGAGTACTCAAA
>probe:Drosophila_2:1627706_a_at:722:89; Interrogation_Position=2246; Antisense; AGTACTCAAAGTCGTTCATCACCTC
>probe:Drosophila_2:1627706_a_at:388:303; Interrogation_Position=2296; Antisense; CCGCGCATCGGTCTCAATCAAATGG
>probe:Drosophila_2:1627706_a_at:597:167; Interrogation_Position=2315; Antisense; AAATGGAGGCCCTGCGAGCGGACCT
>probe:Drosophila_2:1627706_a_at:205:417; Interrogation_Position=2330; Antisense; GAGCGGACCTTATCAATGCCATTCA
>probe:Drosophila_2:1627706_a_at:80:121; Interrogation_Position=2354; Antisense; AGCGCAGCGTGGATCCCAAGTGGAA
>probe:Drosophila_2:1627706_a_at:488:83; Interrogation_Position=2372; Antisense; AGTGGAAGACCATTTCCTGCTCGGT
>probe:Drosophila_2:1627706_a_at:707:619; Interrogation_Position=2389; Antisense; TGCTCGGTCATCTGCTGTGGCTGTG
>probe:Drosophila_2:1627706_a_at:320:719; Interrogation_Position=2427; Antisense; TTCCGTGGTCAACATGTCCGGCCAG
>probe:Drosophila_2:1627706_a_at:637:135; Interrogation_Position=2455; Antisense; ACGCACATCAATCAGTACCAGGAGG
>probe:Drosophila_2:1627706_a_at:200:119; Interrogation_Position=2521; Antisense; AGCTCGATAGCTTTAACTCTGCACC
>probe:Drosophila_2:1627706_a_at:300:321; Interrogation_Position=2559; Antisense; GCCCGGTCGCATCATTCACATAGTG
>probe:Drosophila_2:1627706_a_at:368:651; Interrogation_Position=2574; Antisense; TCACATAGTGCGACATCATCCCAAG

Paste this into a BLAST search page for me
CAGGAGGTCTGCTCAGTATGCCAGCGTATGCCAGCCGTGGAGTACTCAAAAGTACTCAAAGTCGTTCATCACCTCCCGCGCATCGGTCTCAATCAAATGGAAATGGAGGCCCTGCGAGCGGACCTGAGCGGACCTTATCAATGCCATTCAAGCGCAGCGTGGATCCCAAGTGGAAAGTGGAAGACCATTTCCTGCTCGGTTGCTCGGTCATCTGCTGTGGCTGTGTTCCGTGGTCAACATGTCCGGCCAGACGCACATCAATCAGTACCAGGAGGAGCTCGATAGCTTTAACTCTGCACCGCCCGGTCGCATCATTCACATAGTGTCACATAGTGCGACATCATCCCAAG

Full Affymetrix probeset data:

Annotations for 1627706_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720