FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627726_a_at:

>probe:Drosophila_2:1627726_a_at:95:273; Interrogation_Position=1230; Antisense; CATTGTTATCTTCCCGTTTACGATG
>probe:Drosophila_2:1627726_a_at:438:413; Interrogation_Position=1275; Antisense; GACCTATTGGGCGTGCAGTAACTTT
>probe:Drosophila_2:1627726_a_at:489:77; Interrogation_Position=1313; Antisense; AGGTTGCGGTGCTAAGGATTCCCTC
>probe:Drosophila_2:1627726_a_at:559:635; Interrogation_Position=1358; Antisense; TCGAAAAGATGCTGACCCATGCGCC
>probe:Drosophila_2:1627726_a_at:668:85; Interrogation_Position=1384; Antisense; AGTGCACTGCCACCTAAGAAGGGAT
>probe:Drosophila_2:1627726_a_at:721:399; Interrogation_Position=1469; Antisense; GACAGCGCCTGGACGAGATCCGATT
>probe:Drosophila_2:1627726_a_at:245:447; Interrogation_Position=1485; Antisense; GATCCGATTCGCCAAGGCCGGCAAG
>probe:Drosophila_2:1627726_a_at:510:211; Interrogation_Position=1522; Antisense; AAGACGTACAAGTTCGATCCCACGA
>probe:Drosophila_2:1627726_a_at:412:225; Interrogation_Position=1588; Antisense; AAGGAGCCGCCGAACAAGCAGGGAT
>probe:Drosophila_2:1627726_a_at:497:79; Interrogation_Position=1607; Antisense; AGGGATAGTTCCTCCATCCTGTAAT
>probe:Drosophila_2:1627726_a_at:348:417; Interrogation_Position=1639; Antisense; GAGCGCTGTGTCTTGTTACGTTAAT
>probe:Drosophila_2:1627726_a_at:702:677; Interrogation_Position=1673; Antisense; TAGTCTATAGTCCTTCATCATCCGA
>probe:Drosophila_2:1627726_a_at:703:35; Interrogation_Position=1689; Antisense; ATCATCCGAACGTTTTGCTGCTAAA
>probe:Drosophila_2:1627726_a_at:291:357; Interrogation_Position=1737; Antisense; GCAAACTTCTTGCTGATGAAACCTG

Paste this into a BLAST search page for me
CATTGTTATCTTCCCGTTTACGATGGACCTATTGGGCGTGCAGTAACTTTAGGTTGCGGTGCTAAGGATTCCCTCTCGAAAAGATGCTGACCCATGCGCCAGTGCACTGCCACCTAAGAAGGGATGACAGCGCCTGGACGAGATCCGATTGATCCGATTCGCCAAGGCCGGCAAGAAGACGTACAAGTTCGATCCCACGAAAGGAGCCGCCGAACAAGCAGGGATAGGGATAGTTCCTCCATCCTGTAATGAGCGCTGTGTCTTGTTACGTTAATTAGTCTATAGTCCTTCATCATCCGAATCATCCGAACGTTTTGCTGCTAAAGCAAACTTCTTGCTGATGAAACCTG

Full Affymetrix probeset data:

Annotations for 1627726_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720