FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627738_a_at:

>probe:Drosophila_2:1627738_a_at:89:237; Interrogation_Position=1193; Antisense; AATCCCAGCGGTGACACGGAACTGA
>probe:Drosophila_2:1627738_a_at:516:195; Interrogation_Position=1212; Antisense; AACTGATCGGTCTGGACGGCACGCC
>probe:Drosophila_2:1627738_a_at:37:355; Interrogation_Position=1275; Antisense; GAGTTATTAATATCGGCGGTCCGGA
>probe:Drosophila_2:1627738_a_at:644:165; Interrogation_Position=1319; Antisense; AAATGCCTGCTCTACATTGTTACCG
>probe:Drosophila_2:1627738_a_at:210:181; Interrogation_Position=1353; Antisense; AAAACACTGCGCAGGCCTATGAGAG
>probe:Drosophila_2:1627738_a_at:579:55; Interrogation_Position=1371; Antisense; ATGAGAGGACTTCCCCATATACGGC
>probe:Drosophila_2:1627738_a_at:210:177; Interrogation_Position=1403; Antisense; AAACTGCCCGTGGAGATGCGTGGAT
>probe:Drosophila_2:1627738_a_at:481:251; Interrogation_Position=1444; Antisense; CAAGTGGCGGCTTTTGTCAGCGGAA
>probe:Drosophila_2:1627738_a_at:723:387; Interrogation_Position=1478; Antisense; GAAAAGTCCATGGTCTTTGGCGCTC
>probe:Drosophila_2:1627738_a_at:265:633; Interrogation_Position=1501; Antisense; TCCCCACCTGGTTAGGCTAATGATT
>probe:Drosophila_2:1627738_a_at:27:309; Interrogation_Position=1533; Antisense; CCATGTTCTTAAACGCATCGCCGAT
>probe:Drosophila_2:1627738_a_at:623:411; Interrogation_Position=1595; Antisense; GACGCCTTCATCAACTACTTGGAGA
>probe:Drosophila_2:1627738_a_at:481:177; Interrogation_Position=1645; Antisense; AAACTTTGTTAACTCCACTGCCCTG
>probe:Drosophila_2:1627738_a_at:267:301; Interrogation_Position=1704; Antisense; CCCTGGATGGGATTGCTGCTTAGCT

Paste this into a BLAST search page for me
AATCCCAGCGGTGACACGGAACTGAAACTGATCGGTCTGGACGGCACGCCGAGTTATTAATATCGGCGGTCCGGAAAATGCCTGCTCTACATTGTTACCGAAAACACTGCGCAGGCCTATGAGAGATGAGAGGACTTCCCCATATACGGCAAACTGCCCGTGGAGATGCGTGGATCAAGTGGCGGCTTTTGTCAGCGGAAGAAAAGTCCATGGTCTTTGGCGCTCTCCCCACCTGGTTAGGCTAATGATTCCATGTTCTTAAACGCATCGCCGATGACGCCTTCATCAACTACTTGGAGAAAACTTTGTTAACTCCACTGCCCTGCCCTGGATGGGATTGCTGCTTAGCT

Full Affymetrix probeset data:

Annotations for 1627738_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720