FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627773_a_at:

>probe:Drosophila_2:1627773_a_at:581:399; Interrogation_Position=1046; Antisense; GACACCATCGGCAATGCTTTGATCG
>probe:Drosophila_2:1627773_a_at:725:447; Interrogation_Position=1066; Antisense; GATCGACAATCCAACTGGTCTGGCT
>probe:Drosophila_2:1627773_a_at:109:287; Interrogation_Position=1080; Antisense; CTGGTCTGGCTAGCTATATTCTGGA
>probe:Drosophila_2:1627773_a_at:167:29; Interrogation_Position=1125; Antisense; ATACGGCATTTAGATCGCTTCCTGA
>probe:Drosophila_2:1627773_a_at:241:321; Interrogation_Position=1141; Antisense; GCTTCCTGACGGTGGTCTGACCAAG
>probe:Drosophila_2:1627773_a_at:571:15; Interrogation_Position=1168; Antisense; ATTTACCTACGATCAGCTTCTGGAC
>probe:Drosophila_2:1627773_a_at:350:307; Interrogation_Position=1233; Antisense; CCATGCGTCTGTATTCCGAATCAAT
>probe:Drosophila_2:1627773_a_at:95:365; Interrogation_Position=1250; Antisense; GAATCAATGGTTGCCTCGCAGTTTG
>probe:Drosophila_2:1627773_a_at:207:55; Interrogation_Position=1332; Antisense; ATGAGATCACACATTTCTCCGACTC
>probe:Drosophila_2:1627773_a_at:573:631; Interrogation_Position=1349; Antisense; TCCGACTCGGTTTTGGCCAACAAGT
>probe:Drosophila_2:1627773_a_at:95:549; Interrogation_Position=1405; Antisense; GGATGGAGGTCACTTTCCCGCTTTT
>probe:Drosophila_2:1627773_a_at:635:409; Interrogation_Position=1451; Antisense; GACGACTTTGTGTCTTTTGTCCAGA
>probe:Drosophila_2:1627773_a_at:98:217; Interrogation_Position=1520; Antisense; AAGTCCATTGTACATTTTCATCGTG
>probe:Drosophila_2:1627773_a_at:663:601; Interrogation_Position=1603; Antisense; TGTATTTGCCTTATCTGCTTTGAAA

Paste this into a BLAST search page for me
GACACCATCGGCAATGCTTTGATCGGATCGACAATCCAACTGGTCTGGCTCTGGTCTGGCTAGCTATATTCTGGAATACGGCATTTAGATCGCTTCCTGAGCTTCCTGACGGTGGTCTGACCAAGATTTACCTACGATCAGCTTCTGGACCCATGCGTCTGTATTCCGAATCAATGAATCAATGGTTGCCTCGCAGTTTGATGAGATCACACATTTCTCCGACTCTCCGACTCGGTTTTGGCCAACAAGTGGATGGAGGTCACTTTCCCGCTTTTGACGACTTTGTGTCTTTTGTCCAGAAAGTCCATTGTACATTTTCATCGTGTGTATTTGCCTTATCTGCTTTGAAA

Full Affymetrix probeset data:

Annotations for 1627773_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720