FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627778_a_at:

>probe:Drosophila_2:1627778_a_at:534:65; Interrogation_Position=1211; Antisense; ATGGCATAATACTGCCCAGTCGCTG
>probe:Drosophila_2:1627778_a_at:366:665; Interrogation_Position=1236; Antisense; TACACTCAGTCTCTTGGGCTATGGA
>probe:Drosophila_2:1627778_a_at:90:425; Interrogation_Position=1259; Antisense; GAGACGACACGCTTTATGCCGATGA
>probe:Drosophila_2:1627778_a_at:74:565; Interrogation_Position=1287; Antisense; GGAATTCTGGTCTAACGTTTACGAG
>probe:Drosophila_2:1627778_a_at:10:79; Interrogation_Position=1310; Antisense; AGGTCGACATGAGCGATCTGCGAAA
>probe:Drosophila_2:1627778_a_at:403:241; Interrogation_Position=1341; Antisense; AATAGAGGAGCCACTCATGCAGGTG
>probe:Drosophila_2:1627778_a_at:122:429; Interrogation_Position=1375; Antisense; GAGTTCATGCTGACGGAACCCGAAC
>probe:Drosophila_2:1627778_a_at:221:385; Interrogation_Position=1434; Antisense; GAACTATCCAAACTTTACTCACCAG
>probe:Drosophila_2:1627778_a_at:224:379; Interrogation_Position=1476; Antisense; GAAGCCGGGACGATTATCCGCCTTT
>probe:Drosophila_2:1627778_a_at:430:679; Interrogation_Position=1490; Antisense; TATCCGCCTTTGTCGGTTACTTTGA
>probe:Drosophila_2:1627778_a_at:372:611; Interrogation_Position=1512; Antisense; TGAAACATTGTTTGAACTACCCTCC
>probe:Drosophila_2:1627778_a_at:195:209; Interrogation_Position=1582; Antisense; AAGCAAACGGTTTTCTTCATCGAGA
>probe:Drosophila_2:1627778_a_at:67:715; Interrogation_Position=1594; Antisense; TTCTTCATCGAGAACCCGCAGGTTG
>probe:Drosophila_2:1627778_a_at:499:517; Interrogation_Position=1729; Antisense; GTGGTTTAATGTGCTTCTTTTTGAA

Paste this into a BLAST search page for me
ATGGCATAATACTGCCCAGTCGCTGTACACTCAGTCTCTTGGGCTATGGAGAGACGACACGCTTTATGCCGATGAGGAATTCTGGTCTAACGTTTACGAGAGGTCGACATGAGCGATCTGCGAAAAATAGAGGAGCCACTCATGCAGGTGGAGTTCATGCTGACGGAACCCGAACGAACTATCCAAACTTTACTCACCAGGAAGCCGGGACGATTATCCGCCTTTTATCCGCCTTTGTCGGTTACTTTGATGAAACATTGTTTGAACTACCCTCCAAGCAAACGGTTTTCTTCATCGAGATTCTTCATCGAGAACCCGCAGGTTGGTGGTTTAATGTGCTTCTTTTTGAA

Full Affymetrix probeset data:

Annotations for 1627778_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720