FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627885_s_at:

>probe:Drosophila_2:1627885_s_at:12:357; Interrogation_Position=3748; Antisense; GCAAATTGCCGAGCCAATTGCCCAG
>probe:Drosophila_2:1627885_s_at:567:107; Interrogation_Position=3781; Antisense; AGAACCCGCCTACGATTTCGATCAG
>probe:Drosophila_2:1627885_s_at:404:17; Interrogation_Position=3795; Antisense; ATTTCGATCAGGACTTGGTGCCCGA
>probe:Drosophila_2:1627885_s_at:173:249; Interrogation_Position=3831; Antisense; AATTGGAGATTGCTGCTCCCATTCG
>probe:Drosophila_2:1627885_s_at:359:375; Interrogation_Position=3869; Antisense; GAAGACAGCACTGCGATACTCTCGC
>probe:Drosophila_2:1627885_s_at:462:291; Interrogation_Position=3925; Antisense; CGTGCCGGTTTACTTGCTCAATGGA
>probe:Drosophila_2:1627885_s_at:106:107; Interrogation_Position=3949; Antisense; AGAAAGTCGCGATGTCAGCACACCC
>probe:Drosophila_2:1627885_s_at:567:597; Interrogation_Position=3975; Antisense; TGTCCAGCAGCTCTTACAGTGCCGG
>probe:Drosophila_2:1627885_s_at:639:537; Interrogation_Position=4002; Antisense; GGTCAGAGATATATGCGTCGTCGAA
>probe:Drosophila_2:1627885_s_at:211:15; Interrogation_Position=4029; Antisense; ATTTAGTTTAGGATCTCCCCACACA
>probe:Drosophila_2:1627885_s_at:159:103; Interrogation_Position=4053; Antisense; AGACCAGTTGTAGTTCCAGTTGCCG
>probe:Drosophila_2:1627885_s_at:104:237; Interrogation_Position=4082; Antisense; AATCCCATTGATCTTGGCCTGCAAT
>probe:Drosophila_2:1627885_s_at:376:689; Interrogation_Position=4222; Antisense; TATTTTGCAATACCCTTATCCCATT
>probe:Drosophila_2:1627885_s_at:643:213; Interrogation_Position=4248; Antisense; AAGTCAACCCGAACCAAATCCATGT

Paste this into a BLAST search page for me
GCAAATTGCCGAGCCAATTGCCCAGAGAACCCGCCTACGATTTCGATCAGATTTCGATCAGGACTTGGTGCCCGAAATTGGAGATTGCTGCTCCCATTCGGAAGACAGCACTGCGATACTCTCGCCGTGCCGGTTTACTTGCTCAATGGAAGAAAGTCGCGATGTCAGCACACCCTGTCCAGCAGCTCTTACAGTGCCGGGGTCAGAGATATATGCGTCGTCGAAATTTAGTTTAGGATCTCCCCACACAAGACCAGTTGTAGTTCCAGTTGCCGAATCCCATTGATCTTGGCCTGCAATTATTTTGCAATACCCTTATCCCATTAAGTCAACCCGAACCAAATCCATGT

Full Affymetrix probeset data:

Annotations for 1627885_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720