FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627952_a_at:

>probe:Drosophila_2:1627952_a_at:576:19; Interrogation_Position=1022; Antisense; ATTTCCAGGTGGTTTGTCCACACCA
>probe:Drosophila_2:1627952_a_at:655:501; Interrogation_Position=1037; Antisense; GTCCACACCATTGTTGGATCCATCA
>probe:Drosophila_2:1627952_a_at:40:189; Interrogation_Position=1061; Antisense; AACAGCCGGAAAGGTTCTCATGGAT
>probe:Drosophila_2:1627952_a_at:324:557; Interrogation_Position=1148; Antisense; GGACTGTGATCCTCTGGCAATAATG
>probe:Drosophila_2:1627952_a_at:724:177; Interrogation_Position=1209; Antisense; AAACAGTGCTCCTATTGTCGCGATG
>probe:Drosophila_2:1627952_a_at:335:25; Interrogation_Position=1239; Antisense; ATATGGCTGCCGGAGATATTCGCCC
>probe:Drosophila_2:1627952_a_at:544:679; Interrogation_Position=1255; Antisense; TATTCGCCCGCTTTGTTAAGGGTCA
>probe:Drosophila_2:1627952_a_at:664:397; Interrogation_Position=1280; Antisense; GACACATCCCCACGAGATCGATTGG
>probe:Drosophila_2:1627952_a_at:43:555; Interrogation_Position=1303; Antisense; GGACGCTGGTCATTGCCGATAAAAT
>probe:Drosophila_2:1627952_a_at:244:243; Interrogation_Position=1332; Antisense; AATAGTAAGCCCATTTGCGCACTCG
>probe:Drosophila_2:1627952_a_at:186:625; Interrogation_Position=1347; Antisense; TGCGCACTCGCTTATAGCCAAGTCA
>probe:Drosophila_2:1627952_a_at:474:123; Interrogation_Position=1401; Antisense; AGCCGGAAGATCGAGGAACGCCTTT
>probe:Drosophila_2:1627952_a_at:703:373; Interrogation_Position=939; Antisense; GAAGAGATGTCCATACCCCTGAAAG
>probe:Drosophila_2:1627952_a_at:664:541; Interrogation_Position=999; Antisense; GGTTGGGACAATCTCGCAGCAGTAT

Paste this into a BLAST search page for me
ATTTCCAGGTGGTTTGTCCACACCAGTCCACACCATTGTTGGATCCATCAAACAGCCGGAAAGGTTCTCATGGATGGACTGTGATCCTCTGGCAATAATGAAACAGTGCTCCTATTGTCGCGATGATATGGCTGCCGGAGATATTCGCCCTATTCGCCCGCTTTGTTAAGGGTCAGACACATCCCCACGAGATCGATTGGGGACGCTGGTCATTGCCGATAAAATAATAGTAAGCCCATTTGCGCACTCGTGCGCACTCGCTTATAGCCAAGTCAAGCCGGAAGATCGAGGAACGCCTTTGAAGAGATGTCCATACCCCTGAAAGGGTTGGGACAATCTCGCAGCAGTAT

Full Affymetrix probeset data:

Annotations for 1627952_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720