FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627955_a_at:

>probe:Drosophila_2:1627955_a_at:563:483; Interrogation_Position=4891; Antisense; GTATGTTAACAAGCGGACAGCCATT
>probe:Drosophila_2:1627955_a_at:276:207; Interrogation_Position=4901; Antisense; AAGCGGACAGCCATTGCTTCATCGA
>probe:Drosophila_2:1627955_a_at:406:343; Interrogation_Position=4916; Antisense; GCTTCATCGACTCCGTTGCTAAAGA
>probe:Drosophila_2:1627955_a_at:181:681; Interrogation_Position=4948; Antisense; TATGTGCACTTTTAGGTGAGGCCTA
>probe:Drosophila_2:1627955_a_at:512:255; Interrogation_Position=4981; Antisense; CAAATATTGGATGCCTAGACCGATT
>probe:Drosophila_2:1627955_a_at:617:447; Interrogation_Position=4990; Antisense; GATGCCTAGACCGATTTCTCTTATA
>probe:Drosophila_2:1627955_a_at:285:541; Interrogation_Position=5047; Antisense; GGATTATGACACATTGCTGTACTTA
>probe:Drosophila_2:1627955_a_at:271:167; Interrogation_Position=5143; Antisense; AAATGCTCCAAGTTTTTCAATCTAT
>probe:Drosophila_2:1627955_a_at:45:157; Interrogation_Position=5186; Antisense; ACAGCTTTTTTCAATGAGCCCATCG
>probe:Drosophila_2:1627955_a_at:140:415; Interrogation_Position=5201; Antisense; GAGCCCATCGTAATTTTAATTTCGG
>probe:Drosophila_2:1627955_a_at:623:509; Interrogation_Position=5232; Antisense; GTGCAATTTGTGTGTGTCCTGAACC
>probe:Drosophila_2:1627955_a_at:211:599; Interrogation_Position=5246; Antisense; TGTCCTGAACCTTGGAAGTGATTTC
>probe:Drosophila_2:1627955_a_at:214:1; Interrogation_Position=5342; Antisense; ATATACTCGCTATAGTTTTAAACGT
>probe:Drosophila_2:1627955_a_at:181:173; Interrogation_Position=5411; Antisense; AAAGCGTTGGCAGCGATTGTTCTTA

Paste this into a BLAST search page for me
GTATGTTAACAAGCGGACAGCCATTAAGCGGACAGCCATTGCTTCATCGAGCTTCATCGACTCCGTTGCTAAAGATATGTGCACTTTTAGGTGAGGCCTACAAATATTGGATGCCTAGACCGATTGATGCCTAGACCGATTTCTCTTATAGGATTATGACACATTGCTGTACTTAAAATGCTCCAAGTTTTTCAATCTATACAGCTTTTTTCAATGAGCCCATCGGAGCCCATCGTAATTTTAATTTCGGGTGCAATTTGTGTGTGTCCTGAACCTGTCCTGAACCTTGGAAGTGATTTCATATACTCGCTATAGTTTTAAACGTAAAGCGTTGGCAGCGATTGTTCTTA

Full Affymetrix probeset data:

Annotations for 1627955_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720