FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627959_a_at:

>probe:Drosophila_2:1627959_a_at:226:117; Interrogation_Position=1002; Antisense; AGCTTTCGAGTAATGAGTCCGTGGC
>probe:Drosophila_2:1627959_a_at:135:431; Interrogation_Position=1016; Antisense; GAGTCCGTGGCAAGATTTCGTCGTT
>probe:Drosophila_2:1627959_a_at:163:585; Interrogation_Position=1023; Antisense; TGGCAAGATTTCGTCGTTCATACGG
>probe:Drosophila_2:1627959_a_at:471:713; Interrogation_Position=1039; Antisense; TTCATACGGACAGACTGATAGTCAG
>probe:Drosophila_2:1627959_a_at:587:403; Interrogation_Position=1051; Antisense; GACTGATAGTCAGACGGTCATGTTT
>probe:Drosophila_2:1627959_a_at:423:407; Interrogation_Position=1063; Antisense; GACGGTCATGTTTGTTAAGGAATCT
>probe:Drosophila_2:1627959_a_at:407:169; Interrogation_Position=809; Antisense; AAAGTGAAGCTTTCGCGGATTATTC
>probe:Drosophila_2:1627959_a_at:52:207; Interrogation_Position=815; Antisense; AAGCTTTCGCGGATTATTCAATGAA
>probe:Drosophila_2:1627959_a_at:604:247; Interrogation_Position=833; Antisense; CAATGAAATACATACGTACCTGGTT
>probe:Drosophila_2:1627959_a_at:195:137; Interrogation_Position=846; Antisense; ACGTACCTGGTTTAATTCATTCAGC
>probe:Drosophila_2:1627959_a_at:65:247; Interrogation_Position=859; Antisense; AATTCATTCAGCTCTGTTCAACGCG
>probe:Drosophila_2:1627959_a_at:316:473; Interrogation_Position=874; Antisense; GTTCAACGCGGCTTTATCTAAAATA
>probe:Drosophila_2:1627959_a_at:321:685; Interrogation_Position=913; Antisense; TATACAATACGGCATTTTACCGAAA
>probe:Drosophila_2:1627959_a_at:394:179; Interrogation_Position=976; Antisense; AAACAGTTAATGAGCATGTAACCCC

Paste this into a BLAST search page for me
AGCTTTCGAGTAATGAGTCCGTGGCGAGTCCGTGGCAAGATTTCGTCGTTTGGCAAGATTTCGTCGTTCATACGGTTCATACGGACAGACTGATAGTCAGGACTGATAGTCAGACGGTCATGTTTGACGGTCATGTTTGTTAAGGAATCTAAAGTGAAGCTTTCGCGGATTATTCAAGCTTTCGCGGATTATTCAATGAACAATGAAATACATACGTACCTGGTTACGTACCTGGTTTAATTCATTCAGCAATTCATTCAGCTCTGTTCAACGCGGTTCAACGCGGCTTTATCTAAAATATATACAATACGGCATTTTACCGAAAAAACAGTTAATGAGCATGTAACCCC

Full Affymetrix probeset data:

Annotations for 1627959_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720