FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627963_s_at:

>probe:Drosophila_2:1627963_s_at:248:551; Interrogation_Position=1641; Antisense; GGAGAACCGTATCACTATCACCAAT
>probe:Drosophila_2:1627963_s_at:466:35; Interrogation_Position=1657; Antisense; ATCACCAATGACAAGGGCCGTCTCT
>probe:Drosophila_2:1627963_s_at:483:51; Interrogation_Position=1712; Antisense; ATGCGGAGGCTTATCGCCAAGCGGA
>probe:Drosophila_2:1627963_s_at:475:203; Interrogation_Position=1768; Antisense; AACCAGCTGGAGTCGTACTGTTTCC
>probe:Drosophila_2:1627963_s_at:576:451; Interrogation_Position=1846; Antisense; GATCGGGAGACCATCCAGCAGCGGT
>probe:Drosophila_2:1627963_s_at:482:259; Interrogation_Position=1864; Antisense; CAGCGGTCCAGTGAAACAATTGCCT
>probe:Drosophila_2:1627963_s_at:255:161; Interrogation_Position=1879; Antisense; ACAATTGCCTGGTTGGATGCCAATC
>probe:Drosophila_2:1627963_s_at:120:197; Interrogation_Position=1913; Antisense; AACGGCAGGAGTTCGAGCACAAGCA
>probe:Drosophila_2:1627963_s_at:647:425; Interrogation_Position=1948; Antisense; GAGAGAATCTGCAGTCCGATCATCA
>probe:Drosophila_2:1627963_s_at:99:505; Interrogation_Position=1961; Antisense; GTCCGATCATCACGAGGTTGTACCA
>probe:Drosophila_2:1627963_s_at:632:287; Interrogation_Position=2043; Antisense; CGGCTCGGGTCCAACCATTGAGGAG
>probe:Drosophila_2:1627963_s_at:134:723; Interrogation_Position=2123; Antisense; TTGAAATCCGCAGCATCTCGACTAA
>probe:Drosophila_2:1627963_s_at:445:641; Interrogation_Position=2138; Antisense; TCTCGACTAATCTTATTCACCTCTA
>probe:Drosophila_2:1627963_s_at:351:459; Interrogation_Position=2194; Antisense; GATTTCTACATTCTACACGTGCTCG

Paste this into a BLAST search page for me
GGAGAACCGTATCACTATCACCAATATCACCAATGACAAGGGCCGTCTCTATGCGGAGGCTTATCGCCAAGCGGAAACCAGCTGGAGTCGTACTGTTTCCGATCGGGAGACCATCCAGCAGCGGTCAGCGGTCCAGTGAAACAATTGCCTACAATTGCCTGGTTGGATGCCAATCAACGGCAGGAGTTCGAGCACAAGCAGAGAGAATCTGCAGTCCGATCATCAGTCCGATCATCACGAGGTTGTACCACGGCTCGGGTCCAACCATTGAGGAGTTGAAATCCGCAGCATCTCGACTAATCTCGACTAATCTTATTCACCTCTAGATTTCTACATTCTACACGTGCTCG

Full Affymetrix probeset data:

Annotations for 1627963_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720