FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627996_a_at:

>probe:Drosophila_2:1627996_a_at:494:665; Interrogation_Position=2811; Antisense; TACAGTCTCATCTTTTTCATCATGT
>probe:Drosophila_2:1627996_a_at:139:483; Interrogation_Position=2834; Antisense; GTATATGCGCTTAGTTGTTGTCTAG
>probe:Drosophila_2:1627996_a_at:617:465; Interrogation_Position=2850; Antisense; GTTGTCTAGTATACTTCCAAATCGT
>probe:Drosophila_2:1627996_a_at:216:493; Interrogation_Position=2873; Antisense; GTAATCACGGAGCACGGAGCCTAGA
>probe:Drosophila_2:1627996_a_at:649:707; Interrogation_Position=2954; Antisense; TTACTAGTTTCTGGGATGACTTACC
>probe:Drosophila_2:1627996_a_at:390:545; Interrogation_Position=2967; Antisense; GGATGACTTACCCATACCATGGTTA
>probe:Drosophila_2:1627996_a_at:330:483; Interrogation_Position=3028; Antisense; GTATAGTCAATTGTTTTCGCATAAA
>probe:Drosophila_2:1627996_a_at:151:453; Interrogation_Position=3073; Antisense; GATCATTTTAAAGCACTCGCTCAAG
>probe:Drosophila_2:1627996_a_at:680:143; Interrogation_Position=3087; Antisense; ACTCGCTCAAGTGGTTTATACATTT
>probe:Drosophila_2:1627996_a_at:652:337; Interrogation_Position=3160; Antisense; GCTCATTTACATTCGTTAGCACTTG
>probe:Drosophila_2:1627996_a_at:650:675; Interrogation_Position=3176; Antisense; TAGCACTTGAGTTAAGGTCGCCCAT
>probe:Drosophila_2:1627996_a_at:221:537; Interrogation_Position=3191; Antisense; GGTCGCCCATTGTTATTAGCATTAG
>probe:Drosophila_2:1627996_a_at:206:355; Interrogation_Position=3215; Antisense; GCACATATTTAATGGTTTCCTTTCC
>probe:Drosophila_2:1627996_a_at:373:687; Interrogation_Position=3259; Antisense; TATTTCATTATGTACGGTTCGCAAC

Paste this into a BLAST search page for me
TACAGTCTCATCTTTTTCATCATGTGTATATGCGCTTAGTTGTTGTCTAGGTTGTCTAGTATACTTCCAAATCGTGTAATCACGGAGCACGGAGCCTAGATTACTAGTTTCTGGGATGACTTACCGGATGACTTACCCATACCATGGTTAGTATAGTCAATTGTTTTCGCATAAAGATCATTTTAAAGCACTCGCTCAAGACTCGCTCAAGTGGTTTATACATTTGCTCATTTACATTCGTTAGCACTTGTAGCACTTGAGTTAAGGTCGCCCATGGTCGCCCATTGTTATTAGCATTAGGCACATATTTAATGGTTTCCTTTCCTATTTCATTATGTACGGTTCGCAAC

Full Affymetrix probeset data:

Annotations for 1627996_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720