FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1627999_s_at:

>probe:Drosophila_2:1627999_s_at:536:317; Interrogation_Position=2014; Antisense; GCCGTCGCAGGTTGCCAAAGTGATT
>probe:Drosophila_2:1627999_s_at:17:171; Interrogation_Position=2030; Antisense; AAAGTGATTGTTCCATTCGCGAAGA
>probe:Drosophila_2:1627999_s_at:681:387; Interrogation_Position=2083; Antisense; GAAAAAGTCCTGCAACTCTCTAATA
>probe:Drosophila_2:1627999_s_at:255:185; Interrogation_Position=2112; Antisense; AACAATTGCTAAACGCTGTGCCGGA
>probe:Drosophila_2:1627999_s_at:424:457; Interrogation_Position=2143; Antisense; GATACCCTCGCATCCCAAGAAAAAG
>probe:Drosophila_2:1627999_s_at:446:169; Interrogation_Position=2182; Antisense; AAAGGGTTTCGCGAGTTTTCAGCAG
>probe:Drosophila_2:1627999_s_at:686:529; Interrogation_Position=2206; Antisense; GGTGTATCAGAAGCTGCCCGACCTT
>probe:Drosophila_2:1627999_s_at:311:345; Interrogation_Position=2270; Antisense; GCATTCTATGCGGTTCTGCATTTGG
>probe:Drosophila_2:1627999_s_at:218:437; Interrogation_Position=2336; Antisense; GAGGACTTTCAAATTCGCCAGGTGT
>probe:Drosophila_2:1627999_s_at:269:277; Interrogation_Position=2399; Antisense; CTAGTTGCCCTTAAATGCTGTTACA
>probe:Drosophila_2:1627999_s_at:569:159; Interrogation_Position=2421; Antisense; ACAATTTATTTTCACGGCTACTCCT
>probe:Drosophila_2:1627999_s_at:432:669; Interrogation_Position=2439; Antisense; TACTCCTTAATCTCTTACCTCTATT
>probe:Drosophila_2:1627999_s_at:517:145; Interrogation_Position=2468; Antisense; ACTCCCAATTCGTATCAGTATTCTG
>probe:Drosophila_2:1627999_s_at:659:47; Interrogation_Position=2501; Antisense; ATCCTCACCCCAGTCGAATTTTATA

Paste this into a BLAST search page for me
GCCGTCGCAGGTTGCCAAAGTGATTAAAGTGATTGTTCCATTCGCGAAGAGAAAAAGTCCTGCAACTCTCTAATAAACAATTGCTAAACGCTGTGCCGGAGATACCCTCGCATCCCAAGAAAAAGAAAGGGTTTCGCGAGTTTTCAGCAGGGTGTATCAGAAGCTGCCCGACCTTGCATTCTATGCGGTTCTGCATTTGGGAGGACTTTCAAATTCGCCAGGTGTCTAGTTGCCCTTAAATGCTGTTACAACAATTTATTTTCACGGCTACTCCTTACTCCTTAATCTCTTACCTCTATTACTCCCAATTCGTATCAGTATTCTGATCCTCACCCCAGTCGAATTTTATA

Full Affymetrix probeset data:

Annotations for 1627999_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720