FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628011_a_at:

>probe:Drosophila_2:1628011_a_at:646:207; Interrogation_Position=2392; Antisense; AAGCTCACCTGTTTCGTGAAGACGA
>probe:Drosophila_2:1628011_a_at:346:363; Interrogation_Position=2495; Antisense; GAATAGAGCTAACCCGCGTTACGGT
>probe:Drosophila_2:1628011_a_at:275:353; Interrogation_Position=2537; Antisense; GCAGCGTTTACGATGCTCTTGTCAA
>probe:Drosophila_2:1628011_a_at:224:369; Interrogation_Position=2601; Antisense; GAATGTAGCTTTTCGGTTGTTTCGT
>probe:Drosophila_2:1628011_a_at:412:241; Interrogation_Position=2636; Antisense; AATACTCTGACTTCAGCTACTCGGG
>probe:Drosophila_2:1628011_a_at:554:327; Interrogation_Position=2671; Antisense; GCGATGCTCTCCAATGAGACGCGTA
>probe:Drosophila_2:1628011_a_at:546:71; Interrogation_Position=2711; Antisense; AGGCGGTGCTGATGTCCATGTTCCA
>probe:Drosophila_2:1628011_a_at:260:59; Interrogation_Position=2728; Antisense; ATGTTCCATGCCAAAACCGTGCTCG
>probe:Drosophila_2:1628011_a_at:263:619; Interrogation_Position=2747; Antisense; TGCTCGTTGGCCACAGTCTGGAGAG
>probe:Drosophila_2:1628011_a_at:647:225; Interrogation_Position=2779; Antisense; AAGGCACTCAAACTCATTCACGACG
>probe:Drosophila_2:1628011_a_at:581:517; Interrogation_Position=2806; Antisense; GTGGTGGACACATCGGTGCTGTTTC
>probe:Drosophila_2:1628011_a_at:675:503; Interrogation_Position=2821; Antisense; GTGCTGTTTCCCCACAAGATGGGAC
>probe:Drosophila_2:1628011_a_at:338:325; Interrogation_Position=2856; Antisense; GCGAGCTCTGAAAACACTGTGCATT
>probe:Drosophila_2:1628011_a_at:404:533; Interrogation_Position=2943; Antisense; GGTGTGCATTCAGCTCATCAAGTAT

Paste this into a BLAST search page for me
AAGCTCACCTGTTTCGTGAAGACGAGAATAGAGCTAACCCGCGTTACGGTGCAGCGTTTACGATGCTCTTGTCAAGAATGTAGCTTTTCGGTTGTTTCGTAATACTCTGACTTCAGCTACTCGGGGCGATGCTCTCCAATGAGACGCGTAAGGCGGTGCTGATGTCCATGTTCCAATGTTCCATGCCAAAACCGTGCTCGTGCTCGTTGGCCACAGTCTGGAGAGAAGGCACTCAAACTCATTCACGACGGTGGTGGACACATCGGTGCTGTTTCGTGCTGTTTCCCCACAAGATGGGACGCGAGCTCTGAAAACACTGTGCATTGGTGTGCATTCAGCTCATCAAGTAT

Full Affymetrix probeset data:

Annotations for 1628011_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720