FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628032_a_at:

>probe:Drosophila_2:1628032_a_at:120:423; Interrogation_Position=4221; Antisense; TAAAGTTTTTAGCACCAAGTTGGAT
>probe:Drosophila_2:1628032_a_at:665:351; Interrogation_Position=4232; Antisense; GCACCAAGTTGGATTACTTTTTAGC
>probe:Drosophila_2:1628032_a_at:562:707; Interrogation_Position=4264; Antisense; TTGAACAAAATACCCCACTGTAAAT
>probe:Drosophila_2:1628032_a_at:262:689; Interrogation_Position=4370; Antisense; TATTACCTAAATATGTTGCTCCGTT
>probe:Drosophila_2:1628032_a_at:584:23; Interrogation_Position=4380; Antisense; ATATGTTGCTCCGTTTTTCTTTCTT
>probe:Drosophila_2:1628032_a_at:516:589; Interrogation_Position=4386; Antisense; TGCTCCGTTTTTCTTTCTTGGGTAT
>probe:Drosophila_2:1628032_a_at:134:653; Interrogation_Position=4411; Antisense; TCAAAACAATTTGCTGTGATCAGTT
>probe:Drosophila_2:1628032_a_at:594:171; Interrogation_Position=4438; Antisense; AAAGCATTAGACCTGCATTAAATCA
>probe:Drosophila_2:1628032_a_at:96:343; Interrogation_Position=4452; Antisense; GCATTAAATCATCTTATTCGTAGTG
>probe:Drosophila_2:1628032_a_at:479:291; Interrogation_Position=4470; Antisense; CGTAGTGATTTTACTATTCTTCATT
>probe:Drosophila_2:1628032_a_at:372:513; Interrogation_Position=4501; Antisense; GTGTATAAACAAGCTTTCAATCATT
>probe:Drosophila_2:1628032_a_at:339:689; Interrogation_Position=4532; Antisense; TATTTACGAGTTTTACACAACATGA
>probe:Drosophila_2:1628032_a_at:583:481; Interrogation_Position=4571; Antisense; GTATTGGCAATTTTTGGTTCCTGTA
>probe:Drosophila_2:1628032_a_at:77:483; Interrogation_Position=4623; Antisense; GTATTTGCTTTAATGCTTTTTTGAA

Paste this into a BLAST search page for me
TAAAGTTTTTAGCACCAAGTTGGATGCACCAAGTTGGATTACTTTTTAGCTTGAACAAAATACCCCACTGTAAATTATTACCTAAATATGTTGCTCCGTTATATGTTGCTCCGTTTTTCTTTCTTTGCTCCGTTTTTCTTTCTTGGGTATTCAAAACAATTTGCTGTGATCAGTTAAAGCATTAGACCTGCATTAAATCAGCATTAAATCATCTTATTCGTAGTGCGTAGTGATTTTACTATTCTTCATTGTGTATAAACAAGCTTTCAATCATTTATTTACGAGTTTTACACAACATGAGTATTGGCAATTTTTGGTTCCTGTAGTATTTGCTTTAATGCTTTTTTGAA

Full Affymetrix probeset data:

Annotations for 1628032_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720