FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628041_a_at:

>probe:Drosophila_2:1628041_a_at:621:23; Interrogation_Position=2012; Antisense; ATATCCAGACTTTGACCTAACAGAC
>probe:Drosophila_2:1628041_a_at:151:389; Interrogation_Position=2039; Antisense; GAAAGACTTCATCAAGGCGACAGTG
>probe:Drosophila_2:1628041_a_at:616:197; Interrogation_Position=2085; Antisense; AACGACGCGTTGACAAGTCCACTTT
>probe:Drosophila_2:1628041_a_at:251:373; Interrogation_Position=2119; Antisense; GAAGGGTCCAGGCTCTGTACACATA
>probe:Drosophila_2:1628041_a_at:437:89; Interrogation_Position=2167; Antisense; AGTCAGGACGTTGTACGCCGATGCA
>probe:Drosophila_2:1628041_a_at:404:347; Interrogation_Position=2204; Antisense; GCATGGTTCGCGAAATGTAACTCCA
>probe:Drosophila_2:1628041_a_at:645:491; Interrogation_Position=2220; Antisense; GTAACTCCAAGTAGTTGTCTCCTAT
>probe:Drosophila_2:1628041_a_at:601:457; Interrogation_Position=2253; Antisense; GATTTGTACTCCTATCCTAAAAGCT
>probe:Drosophila_2:1628041_a_at:693:207; Interrogation_Position=2273; Antisense; AAGCTATCTGCAGTTCACCTTAATC
>probe:Drosophila_2:1628041_a_at:332:241; Interrogation_Position=2293; Antisense; TAATCCTAACGTCAGCGGCAGTCGA
>probe:Drosophila_2:1628041_a_at:13:569; Interrogation_Position=2309; Antisense; GGCAGTCGACTATCCATTCTTATAT
>probe:Drosophila_2:1628041_a_at:79:701; Interrogation_Position=2355; Antisense; TTTTTATTTGTCCAACCGTGCGCAC
>probe:Drosophila_2:1628041_a_at:57:355; Interrogation_Position=2376; Antisense; GCACGCATGCACATCATTTTCTATT
>probe:Drosophila_2:1628041_a_at:193:485; Interrogation_Position=2410; Antisense; GTATGTGCAAACGACAGCTCTGCGA

Paste this into a BLAST search page for me
ATATCCAGACTTTGACCTAACAGACGAAAGACTTCATCAAGGCGACAGTGAACGACGCGTTGACAAGTCCACTTTGAAGGGTCCAGGCTCTGTACACATAAGTCAGGACGTTGTACGCCGATGCAGCATGGTTCGCGAAATGTAACTCCAGTAACTCCAAGTAGTTGTCTCCTATGATTTGTACTCCTATCCTAAAAGCTAAGCTATCTGCAGTTCACCTTAATCTAATCCTAACGTCAGCGGCAGTCGAGGCAGTCGACTATCCATTCTTATATTTTTTATTTGTCCAACCGTGCGCACGCACGCATGCACATCATTTTCTATTGTATGTGCAAACGACAGCTCTGCGA

Full Affymetrix probeset data:

Annotations for 1628041_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720