FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628093_at:

>probe:Drosophila_2:1628093_at:552:353; Interrogation_Position=2993; Antisense; GCAGCCATCAGCGAGGATTCCCTGT
>probe:Drosophila_2:1628093_at:244:79; Interrogation_Position=3006; Antisense; AGGATTCCCTGTCGCAACAGCAGCG
>probe:Drosophila_2:1628093_at:449:317; Interrogation_Position=3096; Antisense; GCCTGGACTACGAGCTCTTTAGCAT
>probe:Drosophila_2:1628093_at:433:417; Interrogation_Position=3107; Antisense; GAGCTCTTTAGCATCAGCGGAAGCG
>probe:Drosophila_2:1628093_at:401:495; Interrogation_Position=3191; Antisense; GTCTTTGCGGACATGAAGCTCAGCC
>probe:Drosophila_2:1628093_at:668:311; Interrogation_Position=3213; Antisense; GCCAGACGACTGACATTAAAAGCCT
>probe:Drosophila_2:1628093_at:389:653; Interrogation_Position=3228; Antisense; TTAAAAGCCTGTGCCCACCGAAGGG
>probe:Drosophila_2:1628093_at:506:721; Interrogation_Position=3267; Antisense; TTGGCAATGGTAGCTGTCGGTCGTA
>probe:Drosophila_2:1628093_at:103:535; Interrogation_Position=3285; Antisense; GGTCGTACGCCTCTTCCAGAAGGTC
>probe:Drosophila_2:1628093_at:695:323; Interrogation_Position=3324; Antisense; GCGAATCCTTTAGCACGGATCGGTT
>probe:Drosophila_2:1628093_at:575:219; Interrogation_Position=3409; Antisense; AAGTGCCGACAATCTGCTGGCGAAT
>probe:Drosophila_2:1628093_at:530:319; Interrogation_Position=3486; Antisense; GCCGCATGGGCAGCTATCAGTCGAT
>probe:Drosophila_2:1628093_at:165:331; Interrogation_Position=3515; Antisense; GCGGTCAGCGCCTCGCTAGAGGATT
>probe:Drosophila_2:1628093_at:302:79; Interrogation_Position=3534; Antisense; AGGATTCGCTGGGTTACTTGCCATA

Paste this into a BLAST search page for me
GCAGCCATCAGCGAGGATTCCCTGTAGGATTCCCTGTCGCAACAGCAGCGGCCTGGACTACGAGCTCTTTAGCATGAGCTCTTTAGCATCAGCGGAAGCGGTCTTTGCGGACATGAAGCTCAGCCGCCAGACGACTGACATTAAAAGCCTTTAAAAGCCTGTGCCCACCGAAGGGTTGGCAATGGTAGCTGTCGGTCGTAGGTCGTACGCCTCTTCCAGAAGGTCGCGAATCCTTTAGCACGGATCGGTTAAGTGCCGACAATCTGCTGGCGAATGCCGCATGGGCAGCTATCAGTCGATGCGGTCAGCGCCTCGCTAGAGGATTAGGATTCGCTGGGTTACTTGCCATA

Full Affymetrix probeset data:

Annotations for 1628093_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720