FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628105_a_at:

>probe:Drosophila_2:1628105_a_at:434:191; Interrogation_Position=3278; Antisense; AACTTGGCAGAGTTTTGCTAGCGCT
>probe:Drosophila_2:1628105_a_at:455:619; Interrogation_Position=3293; Antisense; TGCTAGCGCTAGAGATATGATATAT
>probe:Drosophila_2:1628105_a_at:676:271; Interrogation_Position=3320; Antisense; CATATACCATATACCACATACGATA
>probe:Drosophila_2:1628105_a_at:401:425; Interrogation_Position=3371; Antisense; GAGAGATCAACCGAGTTGGCTGAAC
>probe:Drosophila_2:1628105_a_at:376:303; Interrogation_Position=3381; Antisense; CCGAGTTGGCTGAACAATAACGTTT
>probe:Drosophila_2:1628105_a_at:716:553; Interrogation_Position=3415; Antisense; GGAGCCCATTTGAACGAAAAGCACT
>probe:Drosophila_2:1628105_a_at:164:229; Interrogation_Position=3457; Antisense; AATGGAAATGATAATCGTCACCGAA
>probe:Drosophila_2:1628105_a_at:232:43; Interrogation_Position=3470; Antisense; ATCGTCACCGAAATATCCCACTAAG
>probe:Drosophila_2:1628105_a_at:112:303; Interrogation_Position=3502; Antisense; CCGCAGCATCGAGTTAACCGAGTTA
>probe:Drosophila_2:1628105_a_at:614:427; Interrogation_Position=3521; Antisense; GAGTTACAACCGCTTCTACTATTTG
>probe:Drosophila_2:1628105_a_at:475:485; Interrogation_Position=3568; Antisense; GTAGGTAAATTTCTGTGTGCTCGTA
>probe:Drosophila_2:1628105_a_at:255:243; Interrogation_Position=3575; Antisense; AATTTCTGTGTGCTCGTAACGAATT
>probe:Drosophila_2:1628105_a_at:279:283; Interrogation_Position=3631; Antisense; CTGAGCAATTTTCACATTTTTTACT
>probe:Drosophila_2:1628105_a_at:16:151; Interrogation_Position=3644; Antisense; ACATTTTTTACTTTGTATCTTGCAA

Paste this into a BLAST search page for me
AACTTGGCAGAGTTTTGCTAGCGCTTGCTAGCGCTAGAGATATGATATATCATATACCATATACCACATACGATAGAGAGATCAACCGAGTTGGCTGAACCCGAGTTGGCTGAACAATAACGTTTGGAGCCCATTTGAACGAAAAGCACTAATGGAAATGATAATCGTCACCGAAATCGTCACCGAAATATCCCACTAAGCCGCAGCATCGAGTTAACCGAGTTAGAGTTACAACCGCTTCTACTATTTGGTAGGTAAATTTCTGTGTGCTCGTAAATTTCTGTGTGCTCGTAACGAATTCTGAGCAATTTTCACATTTTTTACTACATTTTTTACTTTGTATCTTGCAA

Full Affymetrix probeset data:

Annotations for 1628105_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720