FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628126_at:

>probe:Drosophila_2:1628126_at:71:229; Interrogation_Position=1018; Antisense; AATGGCACTCTTTTCCATCGTATGA
>probe:Drosophila_2:1628126_at:700:483; Interrogation_Position=1037; Antisense; GTATGAGGCACTCCGATTGCTTTGC
>probe:Drosophila_2:1628126_at:434:571; Interrogation_Position=1067; Antisense; GGCTTTTTGTCCTGGGAGCAGCAGA
>probe:Drosophila_2:1628126_at:502:729; Interrogation_Position=1127; Antisense; TTGGCATAGGCCTCACAGATACTTG
>probe:Drosophila_2:1628126_at:334:727; Interrogation_Position=1149; Antisense; TTGTCACGACAGCTACTGGAGTTCT
>probe:Drosophila_2:1628126_at:591:543; Interrogation_Position=1191; Antisense; GGATACGTTTGCCTTCACGGAGGAA
>probe:Drosophila_2:1628126_at:707:25; Interrogation_Position=1228; Antisense; ATAGAGCCGCTCCAGAGGAACTATT
>probe:Drosophila_2:1628126_at:714:177; Interrogation_Position=1277; Antisense; AAACTTACTTGGTTCTGTGGCGCAT
>probe:Drosophila_2:1628126_at:284:677; Interrogation_Position=1352; Antisense; TAGAGAAGTACTGCCGAATGCCCTA
>probe:Drosophila_2:1628126_at:208:369; Interrogation_Position=1367; Antisense; GAATGCCCTACGGATATACTGGAGT
>probe:Drosophila_2:1628126_at:514:217; Interrogation_Position=1462; Antisense; AAGTATTTGTATCTGCTCTTCTCCG
>probe:Drosophila_2:1628126_at:311:137; Interrogation_Position=1487; Antisense; ACGACGACGTGGTTTCGCTGGAGCA
>probe:Drosophila_2:1628126_at:344:267; Interrogation_Position=1510; Antisense; CAGTGGGTCTTCAACAGTGCAGGCC
>probe:Drosophila_2:1628126_at:121:523; Interrogation_Position=1551; Antisense; GGGCGTGAACCCAATGTATCGTCAG

Paste this into a BLAST search page for me
AATGGCACTCTTTTCCATCGTATGAGTATGAGGCACTCCGATTGCTTTGCGGCTTTTTGTCCTGGGAGCAGCAGATTGGCATAGGCCTCACAGATACTTGTTGTCACGACAGCTACTGGAGTTCTGGATACGTTTGCCTTCACGGAGGAAATAGAGCCGCTCCAGAGGAACTATTAAACTTACTTGGTTCTGTGGCGCATTAGAGAAGTACTGCCGAATGCCCTAGAATGCCCTACGGATATACTGGAGTAAGTATTTGTATCTGCTCTTCTCCGACGACGACGTGGTTTCGCTGGAGCACAGTGGGTCTTCAACAGTGCAGGCCGGGCGTGAACCCAATGTATCGTCAG

Full Affymetrix probeset data:

Annotations for 1628126_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720