FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628263_s_at:

>probe:Drosophila_2:1628263_s_at:554:655; Interrogation_Position=4169; Antisense; TAATCCCCACTGTATTTAATATAAA
>probe:Drosophila_2:1628263_s_at:686:237; Interrogation_Position=4227; Antisense; AATCTATTTGTTTTGGTTTCTGGCG
>probe:Drosophila_2:1628263_s_at:493:479; Interrogation_Position=4242; Antisense; GTTTCTGGCGACAAAGACAGCATTT
>probe:Drosophila_2:1628263_s_at:267:273; Interrogation_Position=4381; Antisense; CATTCGAGCGAGTTTTTTATAACCG
>probe:Drosophila_2:1628263_s_at:243:199; Interrogation_Position=4401; Antisense; AACCGAGCTCGAACAAAACTATACT
>probe:Drosophila_2:1628263_s_at:661:147; Interrogation_Position=4418; Antisense; ACTATACTCGTATGGGCATGTGAAC
>probe:Drosophila_2:1628263_s_at:350:671; Interrogation_Position=4465; Antisense; TACGTACATGCGAATATACCGATGC
>probe:Drosophila_2:1628263_s_at:433:365; Interrogation_Position=4476; Antisense; GAATATACCGATGCAGACAAACGTA
>probe:Drosophila_2:1628263_s_at:480:443; Interrogation_Position=4514; Antisense; GATGTTGCACAAGAGAGCGTATGGT
>probe:Drosophila_2:1628263_s_at:702:279; Interrogation_Position=4632; Antisense; CTACAACTCTCTACTAATCTGCAAC
>probe:Drosophila_2:1628263_s_at:1:41; Interrogation_Position=4648; Antisense; ATCTGCAACTCGCACACAGATACAG
>probe:Drosophila_2:1628263_s_at:224:97; Interrogation_Position=4665; Antisense; AGATACAGATGCACCGGCATCCCTG
>probe:Drosophila_2:1628263_s_at:219:131; Interrogation_Position=4677; Antisense; ACCGGCATCCCTGTGTTTAAATGGA
>probe:Drosophila_2:1628263_s_at:416:401; Interrogation_Position=4734; Antisense; GACATGAATAAACCGAAACCCAACT

Paste this into a BLAST search page for me
TAATCCCCACTGTATTTAATATAAAAATCTATTTGTTTTGGTTTCTGGCGGTTTCTGGCGACAAAGACAGCATTTCATTCGAGCGAGTTTTTTATAACCGAACCGAGCTCGAACAAAACTATACTACTATACTCGTATGGGCATGTGAACTACGTACATGCGAATATACCGATGCGAATATACCGATGCAGACAAACGTAGATGTTGCACAAGAGAGCGTATGGTCTACAACTCTCTACTAATCTGCAACATCTGCAACTCGCACACAGATACAGAGATACAGATGCACCGGCATCCCTGACCGGCATCCCTGTGTTTAAATGGAGACATGAATAAACCGAAACCCAACT

Full Affymetrix probeset data:

Annotations for 1628263_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720