FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628290_s_at:

>probe:Drosophila_2:1628290_s_at:436:415; Interrogation_Position=1034; Antisense; GAGCGTTTCGGATCGATATCCCATT
>probe:Drosophila_2:1628290_s_at:397:45; Interrogation_Position=1051; Antisense; ATCCCATTGGATTCGATGCTGTGCC
>probe:Drosophila_2:1628290_s_at:226:241; Interrogation_Position=1109; Antisense; AATAGTAGAGAATTGCCCGCCCGTG
>probe:Drosophila_2:1628290_s_at:611:441; Interrogation_Position=1136; Antisense; GATGGGTCATCATTGTCCCACGACA
>probe:Drosophila_2:1628290_s_at:322:245; Interrogation_Position=1160; Antisense; AATTCATGGCGACTTTTACTTACAA
>probe:Drosophila_2:1628290_s_at:137:197; Interrogation_Position=1188; Antisense; AACGGACATACACCTTTTGCTCGAG
>probe:Drosophila_2:1628290_s_at:318:225; Interrogation_Position=1215; Antisense; AAGGAGGGCACTGTCTACGTTGACC
>probe:Drosophila_2:1628290_s_at:244:671; Interrogation_Position=1230; Antisense; TACGTTGACCCCAAGGATCTGCTGG
>probe:Drosophila_2:1628290_s_at:14:689; Interrogation_Position=1356; Antisense; TATTGTTGTTTCTATGACGCCTTAC
>probe:Drosophila_2:1628290_s_at:594:609; Interrogation_Position=1370; Antisense; TGACGCCTTACACCACATTTTGATT
>probe:Drosophila_2:1628290_s_at:296:231; Interrogation_Position=843; Antisense; AATGATGCGGAGTTCGTCGACGTGA
>probe:Drosophila_2:1628290_s_at:708:355; Interrogation_Position=910; Antisense; GCACGGCGGATTTCTGGCCAAATGG
>probe:Drosophila_2:1628290_s_at:514:229; Interrogation_Position=930; Antisense; AATGGTGGATACAGCCTGCAGCCTG
>probe:Drosophila_2:1628290_s_at:339:451; Interrogation_Position=993; Antisense; GATCTGTCCAGTCATCGGAGGAGCT

Paste this into a BLAST search page for me
GAGCGTTTCGGATCGATATCCCATTATCCCATTGGATTCGATGCTGTGCCAATAGTAGAGAATTGCCCGCCCGTGGATGGGTCATCATTGTCCCACGACAAATTCATGGCGACTTTTACTTACAAAACGGACATACACCTTTTGCTCGAGAAGGAGGGCACTGTCTACGTTGACCTACGTTGACCCCAAGGATCTGCTGGTATTGTTGTTTCTATGACGCCTTACTGACGCCTTACACCACATTTTGATTAATGATGCGGAGTTCGTCGACGTGAGCACGGCGGATTTCTGGCCAAATGGAATGGTGGATACAGCCTGCAGCCTGGATCTGTCCAGTCATCGGAGGAGCT

Full Affymetrix probeset data:

Annotations for 1628290_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720