FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628323_s_at:

>probe:Drosophila_2:1628323_s_at:721:199; Interrogation_Position=1613; Antisense; AACGCCAGCAATCGCATGATTCCGA
>probe:Drosophila_2:1628323_s_at:700:9; Interrogation_Position=1631; Antisense; ATTCCGATGGAGATCTGTCGCTCGC
>probe:Drosophila_2:1628323_s_at:323:401; Interrogation_Position=1670; Antisense; GACATCGGTGACTGGTGGCTAATCT
>probe:Drosophila_2:1628323_s_at:248:583; Interrogation_Position=1685; Antisense; TGGCTAATCTATATGCTGGGTCGCA
>probe:Drosophila_2:1628323_s_at:389:593; Interrogation_Position=1701; Antisense; TGGGTCGCAATCTTGATCCGGTCAT
>probe:Drosophila_2:1628323_s_at:513:575; Interrogation_Position=1714; Antisense; TGATCCGGTCATCTACAAGGACGTG
>probe:Drosophila_2:1628323_s_at:666:719; Interrogation_Position=1749; Antisense; TTGCCAAGCAGGTGGAGCCCTCCAA
>probe:Drosophila_2:1628323_s_at:345:135; Interrogation_Position=1776; Antisense; ACGACCGTGCCAAGTAGACCAGATG
>probe:Drosophila_2:1628323_s_at:475:413; Interrogation_Position=1792; Antisense; GACCAGATGTACGAGATGATGCCCC
>probe:Drosophila_2:1628323_s_at:33:21; Interrogation_Position=1832; Antisense; ATATATCAATCACCCTGCCTATTAG
>probe:Drosophila_2:1628323_s_at:497:701; Interrogation_Position=1853; Antisense; TTAGTCCCCATCATTTTGTCCGAAA
>probe:Drosophila_2:1628323_s_at:371:199; Interrogation_Position=1975; Antisense; AACGCCCCGTTGGTAGTTCTGTGAT
>probe:Drosophila_2:1628323_s_at:474:93; Interrogation_Position=1989; Antisense; AGTTCTGTGATTAAGCCCTGACCTT
>probe:Drosophila_2:1628323_s_at:513:453; Interrogation_Position=2092; Antisense; GATCACAACTCGAATCGCTTGGCAG

Paste this into a BLAST search page for me
AACGCCAGCAATCGCATGATTCCGAATTCCGATGGAGATCTGTCGCTCGCGACATCGGTGACTGGTGGCTAATCTTGGCTAATCTATATGCTGGGTCGCATGGGTCGCAATCTTGATCCGGTCATTGATCCGGTCATCTACAAGGACGTGTTGCCAAGCAGGTGGAGCCCTCCAAACGACCGTGCCAAGTAGACCAGATGGACCAGATGTACGAGATGATGCCCCATATATCAATCACCCTGCCTATTAGTTAGTCCCCATCATTTTGTCCGAAAAACGCCCCGTTGGTAGTTCTGTGATAGTTCTGTGATTAAGCCCTGACCTTGATCACAACTCGAATCGCTTGGCAG

Full Affymetrix probeset data:

Annotations for 1628323_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720