FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628349_a_at:

>probe:Drosophila_2:1628349_a_at:326:533; Interrogation_Position=2449; Antisense; GGTGATCTATTAGTTCCGGCTCGTC
>probe:Drosophila_2:1628349_a_at:538:279; Interrogation_Position=2482; Antisense; CTCCTGCCTTATTTTGTCCTTGGGA
>probe:Drosophila_2:1628349_a_at:240:553; Interrogation_Position=2504; Antisense; GGAGCTACTTTCCTGTTCGGATTTG
>probe:Drosophila_2:1628349_a_at:526:545; Interrogation_Position=2537; Antisense; GGCATCCTCCTTCTTCGGAAGGGAA
>probe:Drosophila_2:1628349_a_at:399:561; Interrogation_Position=2553; Antisense; GGAAGGGAATCAGTGGCCCCATCTT
>probe:Drosophila_2:1628349_a_at:436:37; Interrogation_Position=2573; Antisense; ATCTTCCTCCATTTTCGTGGGTGGC
>probe:Drosophila_2:1628349_a_at:46:449; Interrogation_Position=2598; Antisense; GATCCTGCAGTATCCTCACTTGAAG
>probe:Drosophila_2:1628349_a_at:307:21; Interrogation_Position=2772; Antisense; ATATTGTCGTTGGAGTCATCGCTGG
>probe:Drosophila_2:1628349_a_at:708:545; Interrogation_Position=2795; Antisense; GGATCCAATTACTAGCTCCACAGAT
>probe:Drosophila_2:1628349_a_at:381:505; Interrogation_Position=2870; Antisense; GTCCAGCTTGTCCTCAAAGTCAATA
>probe:Drosophila_2:1628349_a_at:166:189; Interrogation_Position=2894; Antisense; AACTTCGGCTTTATCGTTTGATGGC
>probe:Drosophila_2:1628349_a_at:312:479; Interrogation_Position=2909; Antisense; GTTTGATGGCGAGGCTACGACGTCA
>probe:Drosophila_2:1628349_a_at:141:297; Interrogation_Position=2926; Antisense; CGACGTCATCCACATTTTTCAGAAT
>probe:Drosophila_2:1628349_a_at:624:41; Interrogation_Position=2954; Antisense; ATCGTCAATGACACTGGCCATATCA

Paste this into a BLAST search page for me
GGTGATCTATTAGTTCCGGCTCGTCCTCCTGCCTTATTTTGTCCTTGGGAGGAGCTACTTTCCTGTTCGGATTTGGGCATCCTCCTTCTTCGGAAGGGAAGGAAGGGAATCAGTGGCCCCATCTTATCTTCCTCCATTTTCGTGGGTGGCGATCCTGCAGTATCCTCACTTGAAGATATTGTCGTTGGAGTCATCGCTGGGGATCCAATTACTAGCTCCACAGATGTCCAGCTTGTCCTCAAAGTCAATAAACTTCGGCTTTATCGTTTGATGGCGTTTGATGGCGAGGCTACGACGTCACGACGTCATCCACATTTTTCAGAATATCGTCAATGACACTGGCCATATCA

Full Affymetrix probeset data:

Annotations for 1628349_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720