FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628352_a_at:

>probe:Drosophila_2:1628352_a_at:299:547; Interrogation_Position=2584; Antisense; GGAGACGTGGCCTTATTCTTAGATT
>probe:Drosophila_2:1628352_a_at:162:489; Interrogation_Position=2742; Antisense; GTACTGCGTATATCCTAGACATCTG
>probe:Drosophila_2:1628352_a_at:209:105; Interrogation_Position=2758; Antisense; AGACATCTGCATTAGCCAAAATCCA
>probe:Drosophila_2:1628352_a_at:3:165; Interrogation_Position=2776; Antisense; AAATCCAGTCCAGGTAGCGATCCAC
>probe:Drosophila_2:1628352_a_at:27:449; Interrogation_Position=2794; Antisense; GATCCACGCGAGTGTAGATACCCGG
>probe:Drosophila_2:1628352_a_at:650:49; Interrogation_Position=2856; Antisense; ATGCCGATCGTGACCCAGCGTTGGT
>probe:Drosophila_2:1628352_a_at:621:89; Interrogation_Position=2886; Antisense; AGTTGTACCAACAGAGGACCTCCGC
>probe:Drosophila_2:1628352_a_at:448:341; Interrogation_Position=2909; Antisense; GCTATCGCCTTGACAGGAGTCCTGA
>probe:Drosophila_2:1628352_a_at:153:545; Interrogation_Position=2924; Antisense; GGAGTCCTGACCTCCTTCCGGAAAT
>probe:Drosophila_2:1628352_a_at:697:559; Interrogation_Position=2943; Antisense; GGAAATCCAGCGCACATGGCAGTGT
>probe:Drosophila_2:1628352_a_at:616:349; Interrogation_Position=2961; Antisense; GCAGTGTCCGGAACGTGCTGTACAA
>probe:Drosophila_2:1628352_a_at:497:231; Interrogation_Position=2985; Antisense; AATGACGACCTGCAATCGGACTGCT
>probe:Drosophila_2:1628352_a_at:646:405; Interrogation_Position=3003; Antisense; GACTGCTTCCAAACCGGCAGGTTAA
>probe:Drosophila_2:1628352_a_at:555:277; Interrogation_Position=3070; Antisense; CTTTCTTTGTTATGTTCAGCTTGAG

Paste this into a BLAST search page for me
GGAGACGTGGCCTTATTCTTAGATTGTACTGCGTATATCCTAGACATCTGAGACATCTGCATTAGCCAAAATCCAAAATCCAGTCCAGGTAGCGATCCACGATCCACGCGAGTGTAGATACCCGGATGCCGATCGTGACCCAGCGTTGGTAGTTGTACCAACAGAGGACCTCCGCGCTATCGCCTTGACAGGAGTCCTGAGGAGTCCTGACCTCCTTCCGGAAATGGAAATCCAGCGCACATGGCAGTGTGCAGTGTCCGGAACGTGCTGTACAAAATGACGACCTGCAATCGGACTGCTGACTGCTTCCAAACCGGCAGGTTAACTTTCTTTGTTATGTTCAGCTTGAG

Full Affymetrix probeset data:

Annotations for 1628352_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720