FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628372_a_at:

>probe:Drosophila_2:1628372_a_at:398:641; Interrogation_Position=1567; Antisense; TCTGCGCAGAACCTATCCAAATCTA
>probe:Drosophila_2:1628372_a_at:465:49; Interrogation_Position=1581; Antisense; ATCCAAATCTATACATGCTGCCCGA
>probe:Drosophila_2:1628372_a_at:448:279; Interrogation_Position=1611; Antisense; CTCTGGTGGACTTGGATGGCTTTAC
>probe:Drosophila_2:1628372_a_at:475:321; Interrogation_Position=1641; Antisense; GCGTTACCTCAACCGACGTGGTGGA
>probe:Drosophila_2:1628372_a_at:654:517; Interrogation_Position=1661; Antisense; GTGGACCACCTGTTGAGTCACGAGT
>probe:Drosophila_2:1628372_a_at:342:137; Interrogation_Position=1680; Antisense; ACGAGTTTGCTGTGAATGCCGGCGA
>probe:Drosophila_2:1628372_a_at:409:331; Interrogation_Position=1769; Antisense; GCGGACGAAGACATGGCCTACGATT
>probe:Drosophila_2:1628372_a_at:381:671; Interrogation_Position=1787; Antisense; TACGATTCCCAGCTGGCGTTGAAAT
>probe:Drosophila_2:1628372_a_at:285:167; Interrogation_Position=1834; Antisense; AAATGTGCTCATCTTGCCCAGCGAT
>probe:Drosophila_2:1628372_a_at:251:17; Interrogation_Position=1866; Antisense; ATTTCATCCGCTTGGTCAACGACTG
>probe:Drosophila_2:1628372_a_at:436:493; Interrogation_Position=1880; Antisense; GTCAACGACTGCCTGGTGATCAATC
>probe:Drosophila_2:1628372_a_at:537:161; Interrogation_Position=1972; Antisense; AAAGGCGGCCAACATGTTCAACAGT
>probe:Drosophila_2:1628372_a_at:239:189; Interrogation_Position=1991; Antisense; AACAGTGTGGCGTGTCAAGTCCAAC
>probe:Drosophila_2:1628372_a_at:484:345; Interrogation_Position=2016; Antisense; GCATCTAACCTGACCACTTTGTGAT

Paste this into a BLAST search page for me
TCTGCGCAGAACCTATCCAAATCTAATCCAAATCTATACATGCTGCCCGACTCTGGTGGACTTGGATGGCTTTACGCGTTACCTCAACCGACGTGGTGGAGTGGACCACCTGTTGAGTCACGAGTACGAGTTTGCTGTGAATGCCGGCGAGCGGACGAAGACATGGCCTACGATTTACGATTCCCAGCTGGCGTTGAAATAAATGTGCTCATCTTGCCCAGCGATATTTCATCCGCTTGGTCAACGACTGGTCAACGACTGCCTGGTGATCAATCAAAGGCGGCCAACATGTTCAACAGTAACAGTGTGGCGTGTCAAGTCCAACGCATCTAACCTGACCACTTTGTGAT

Full Affymetrix probeset data:

Annotations for 1628372_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720