FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628399_s_at:

>probe:Drosophila_2:1628399_s_at:58:287; Interrogation_Position=1006; Antisense; CGTTCGCCCAAACGTGAGCGTGACT
>probe:Drosophila_2:1628399_s_at:178:451; Interrogation_Position=1117; Antisense; GATCGATCCGCATCGGCTGAAAACA
>probe:Drosophila_2:1628399_s_at:448:335; Interrogation_Position=1132; Antisense; GCTGAAAACAAGTCGCGTTCGCGCT
>probe:Drosophila_2:1628399_s_at:122:641; Interrogation_Position=1168; Antisense; TCGGCCTCGCCCAAAAATGGAAACG
>probe:Drosophila_2:1628399_s_at:513:261; Interrogation_Position=1196; Antisense; CACCGGACCGCAATAACGAGAGCAT
>probe:Drosophila_2:1628399_s_at:261:461; Interrogation_Position=1225; Antisense; GATTAGATTAGTTAGCTGTCCCATT
>probe:Drosophila_2:1628399_s_at:534:55; Interrogation_Position=1342; Antisense; ATGAAATCATACCAATCCACCACTG
>probe:Drosophila_2:1628399_s_at:194:579; Interrogation_Position=1370; Antisense; GGCCTCGTCATTTTCTTTTAAATAT
>probe:Drosophila_2:1628399_s_at:29:193; Interrogation_Position=1397; Antisense; AACGACAATTTGTCCTAAGTCTTGT
>probe:Drosophila_2:1628399_s_at:485:217; Interrogation_Position=1413; Antisense; AAGTCTTGTTGTGGACATGGGACAT
>probe:Drosophila_2:1628399_s_at:582:227; Interrogation_Position=1465; Antisense; AATGTGCCGATTTGGATTCAAGGAG
>probe:Drosophila_2:1628399_s_at:686:223; Interrogation_Position=1484; Antisense; AAGGAGTACATATAGGCCACGAAAT
>probe:Drosophila_2:1628399_s_at:625:579; Interrogation_Position=1498; Antisense; GGCCACGAAATTACTGCGACTTGTA
>probe:Drosophila_2:1628399_s_at:566:325; Interrogation_Position=1513; Antisense; GCGACTTGTACACCGGAACACTTAA

Paste this into a BLAST search page for me
CGTTCGCCCAAACGTGAGCGTGACTGATCGATCCGCATCGGCTGAAAACAGCTGAAAACAAGTCGCGTTCGCGCTTCGGCCTCGCCCAAAAATGGAAACGCACCGGACCGCAATAACGAGAGCATGATTAGATTAGTTAGCTGTCCCATTATGAAATCATACCAATCCACCACTGGGCCTCGTCATTTTCTTTTAAATATAACGACAATTTGTCCTAAGTCTTGTAAGTCTTGTTGTGGACATGGGACATAATGTGCCGATTTGGATTCAAGGAGAAGGAGTACATATAGGCCACGAAATGGCCACGAAATTACTGCGACTTGTAGCGACTTGTACACCGGAACACTTAA

Full Affymetrix probeset data:

Annotations for 1628399_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720