FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628469_a_at:

>probe:Drosophila_2:1628469_a_at:175:719; Interrogation_Position=8743; Antisense; TTCCACTTTTTCCATTTACACTCTA
>probe:Drosophila_2:1628469_a_at:630:457; Interrogation_Position=8773; Antisense; GATATCCTTCTCTGTCGTTTAATTT
>probe:Drosophila_2:1628469_a_at:110:393; Interrogation_Position=8817; Antisense; GAAAGACCAGGCTTAACCCATTGAT
>probe:Drosophila_2:1628469_a_at:5:711; Interrogation_Position=8829; Antisense; TTAACCCATTGATGGCCAGGCAAAA
>probe:Drosophila_2:1628469_a_at:466:401; Interrogation_Position=8894; Antisense; GACATATTTGAGATTTCTGGCTCCA
>probe:Drosophila_2:1628469_a_at:5:715; Interrogation_Position=8908; Antisense; TTCTGGCTCCAGAGGCGGAAAACTG
>probe:Drosophila_2:1628469_a_at:52:575; Interrogation_Position=8921; Antisense; GGCGGAAAACTGGATGGCTTGACAT
>probe:Drosophila_2:1628469_a_at:102:69; Interrogation_Position=8934; Antisense; ATGGCTTGACATCGATCCTTGCTAG
>probe:Drosophila_2:1628469_a_at:447:307; Interrogation_Position=8950; Antisense; CCTTGCTAGGCGCTGTTGGTATATA
>probe:Drosophila_2:1628469_a_at:1:259; Interrogation_Position=9010; Antisense; CACACATTTTGTACTCTTGATTTGA
>probe:Drosophila_2:1628469_a_at:269:401; Interrogation_Position=9033; Antisense; GACATTTATCTTTTGTGTTCGCCTT
>probe:Drosophila_2:1628469_a_at:638:713; Interrogation_Position=9045; Antisense; TTGTGTTCGCCTTAGTTTGGAAATT
>probe:Drosophila_2:1628469_a_at:498:401; Interrogation_Position=9080; Antisense; GACATGATTTTCTTTCGGTTAACTA
>probe:Drosophila_2:1628469_a_at:658:539; Interrogation_Position=9096; Antisense; GGTTAACTATATTATTCAGCTGCAA

Paste this into a BLAST search page for me
TTCCACTTTTTCCATTTACACTCTAGATATCCTTCTCTGTCGTTTAATTTGAAAGACCAGGCTTAACCCATTGATTTAACCCATTGATGGCCAGGCAAAAGACATATTTGAGATTTCTGGCTCCATTCTGGCTCCAGAGGCGGAAAACTGGGCGGAAAACTGGATGGCTTGACATATGGCTTGACATCGATCCTTGCTAGCCTTGCTAGGCGCTGTTGGTATATACACACATTTTGTACTCTTGATTTGAGACATTTATCTTTTGTGTTCGCCTTTTGTGTTCGCCTTAGTTTGGAAATTGACATGATTTTCTTTCGGTTAACTAGGTTAACTATATTATTCAGCTGCAA

Full Affymetrix probeset data:

Annotations for 1628469_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720