FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628486_a_at:

>probe:Drosophila_2:1628486_a_at:173:447; Interrogation_Position=1170; Antisense; GATGCTGGAGCTTCCAATGACTCAA
>probe:Drosophila_2:1628486_a_at:261:63; Interrogation_Position=1209; Antisense; ATGGTTGCCATAAACGCGGGCCTGA
>probe:Drosophila_2:1628486_a_at:542:229; Interrogation_Position=1242; Antisense; AATGTTTGCAATGCGCATCCGGTGC
>probe:Drosophila_2:1628486_a_at:306:255; Interrogation_Position=1281; Antisense; CAAACGGTGTTTGCTACTGGTAATA
>probe:Drosophila_2:1628486_a_at:495:485; Interrogation_Position=1320; Antisense; GTAGAACGTGACATAGCGCAACCAT
>probe:Drosophila_2:1628486_a_at:450:27; Interrogation_Position=1332; Antisense; ATAGCGCAACCATCACCTTATTGTG
>probe:Drosophila_2:1628486_a_at:497:127; Interrogation_Position=1392; Antisense; ACCAATATGCCCGAAGAGCTAGTAT
>probe:Drosophila_2:1628486_a_at:59:275; Interrogation_Position=1410; Antisense; CTAGTATCGTGCTCGGACTGTGGTC
>probe:Drosophila_2:1628486_a_at:670:405; Interrogation_Position=1425; Antisense; GACTGTGGTCGTTCCGGTCATCCAT
>probe:Drosophila_2:1628486_a_at:564:537; Interrogation_Position=1440; Antisense; GGTCATCCATCGTGTCTGCAGTTCA
>probe:Drosophila_2:1628486_a_at:405:369; Interrogation_Position=1512; Antisense; GAATGCAAGTACTGCTCCATCTGTG
>probe:Drosophila_2:1628486_a_at:484:285; Interrogation_Position=1532; Antisense; CTGTGGGACCTCTGATAATGACGAT
>probe:Drosophila_2:1628486_a_at:230:543; Interrogation_Position=1587; Antisense; GGATACCATATGTACTGCCTGTCAC
>probe:Drosophila_2:1628486_a_at:706:259; Interrogation_Position=1627; Antisense; CACCAGAGGGTTCTTGGAGCTGCAA

Paste this into a BLAST search page for me
GATGCTGGAGCTTCCAATGACTCAAATGGTTGCCATAAACGCGGGCCTGAAATGTTTGCAATGCGCATCCGGTGCCAAACGGTGTTTGCTACTGGTAATAGTAGAACGTGACATAGCGCAACCATATAGCGCAACCATCACCTTATTGTGACCAATATGCCCGAAGAGCTAGTATCTAGTATCGTGCTCGGACTGTGGTCGACTGTGGTCGTTCCGGTCATCCATGGTCATCCATCGTGTCTGCAGTTCAGAATGCAAGTACTGCTCCATCTGTGCTGTGGGACCTCTGATAATGACGATGGATACCATATGTACTGCCTGTCACCACCAGAGGGTTCTTGGAGCTGCAA

Full Affymetrix probeset data:

Annotations for 1628486_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720