FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628506_a_at:

>probe:Drosophila_2:1628506_a_at:334:505; Interrogation_Position=1451; Antisense; GTGCGCGGAGGAACCACTACTTTGG
>probe:Drosophila_2:1628506_a_at:330:649; Interrogation_Position=1503; Antisense; TCAGTTCCATTCATGTGGCTCCGAA
>probe:Drosophila_2:1628506_a_at:530:583; Interrogation_Position=1518; Antisense; TGGCTCCGAAGTTCACCTCGAAGAA
>probe:Drosophila_2:1628506_a_at:482:721; Interrogation_Position=1562; Antisense; TTGCTGAAGCTGAACCAATCCCTGA
>probe:Drosophila_2:1628506_a_at:661:407; Interrogation_Position=1585; Antisense; GACGGGCACCAATATCGGAACCATA
>probe:Drosophila_2:1628506_a_at:467:249; Interrogation_Position=1630; Antisense; CAAGGCCGGTTCAAGGGTACGCATT
>probe:Drosophila_2:1628506_a_at:46:373; Interrogation_Position=1676; Antisense; GAAGGTTCTACAACGGCATCCAAAA
>probe:Drosophila_2:1628506_a_at:334:35; Interrogation_Position=1772; Antisense; ATCACCAAGTACATGCTTTGTGCCC
>probe:Drosophila_2:1628506_a_at:645:297; Interrogation_Position=1796; Antisense; CGCGCTGCTGGCAAGGATTCATGCA
>probe:Drosophila_2:1628506_a_at:439:531; Interrogation_Position=1832; Antisense; GGTGGCCCAGTGACCAGGAACAACA
>probe:Drosophila_2:1628506_a_at:305:387; Interrogation_Position=1849; Antisense; GAACAACACACTCTTGGGCATCGTA
>probe:Drosophila_2:1628506_a_at:568:567; Interrogation_Position=1865; Antisense; GGCATCGTATCCTTTGGCTACGGGT
>probe:Drosophila_2:1628506_a_at:113:415; Interrogation_Position=1896; Antisense; GAGCCGGCTACCCAGGTGTATACAC
>probe:Drosophila_2:1628506_a_at:320:687; Interrogation_Position=1914; Antisense; TATACACAGCCGTGGTTGCGATCCG

Paste this into a BLAST search page for me
GTGCGCGGAGGAACCACTACTTTGGTCAGTTCCATTCATGTGGCTCCGAATGGCTCCGAAGTTCACCTCGAAGAATTGCTGAAGCTGAACCAATCCCTGAGACGGGCACCAATATCGGAACCATACAAGGCCGGTTCAAGGGTACGCATTGAAGGTTCTACAACGGCATCCAAAAATCACCAAGTACATGCTTTGTGCCCCGCGCTGCTGGCAAGGATTCATGCAGGTGGCCCAGTGACCAGGAACAACAGAACAACACACTCTTGGGCATCGTAGGCATCGTATCCTTTGGCTACGGGTGAGCCGGCTACCCAGGTGTATACACTATACACAGCCGTGGTTGCGATCCG

Full Affymetrix probeset data:

Annotations for 1628506_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720