FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628516_at:

>probe:Drosophila_2:1628516_at:143:371; Interrogation_Position=126; Antisense; GAAGGCGTTCGTGGAGCAGCAAATA
>probe:Drosophila_2:1628516_at:342:61; Interrogation_Position=13; Antisense; ATGTCCGACGAGTACGCCTGCGTGG
>probe:Drosophila_2:1628516_at:665:309; Interrogation_Position=179; Antisense; CCACCAGTGGCTACGAGCGGAAGCT
>probe:Drosophila_2:1628516_at:325:137; Interrogation_Position=191; Antisense; ACGAGCGGAAGCTCACCAAGGCCGA
>probe:Drosophila_2:1628516_at:700:317; Interrogation_Position=211; Antisense; GCCGAGCTGGCCAGTAAGAAGCAGC
>probe:Drosophila_2:1628516_at:15:297; Interrogation_Position=247; Antisense; CGCAACAAGCGAATCATGGACAAGG
>probe:Drosophila_2:1628516_at:226:59; Interrogation_Position=262; Antisense; ATGGACAAGGCACAAACCACCCACA
>probe:Drosophila_2:1628516_at:414:175; Interrogation_Position=275; Antisense; AAACCACCCACAAGGAGCGCGTGGA
>probe:Drosophila_2:1628516_at:565:423; Interrogation_Position=298; Antisense; GAGAAATTCAACGAGCACCTGGACA
>probe:Drosophila_2:1628516_at:487:585; Interrogation_Position=317; Antisense; TGGACACGCTCACCGAGCACTTTGA
>probe:Drosophila_2:1628516_at:55:421; Interrogation_Position=331; Antisense; GAGCACTTTGACATCCCCAAGGTGT
>probe:Drosophila_2:1628516_at:86:523; Interrogation_Position=34; Antisense; GTGGCCAAGGGCAAGCTTAAACTAA
>probe:Drosophila_2:1628516_at:678:43; Interrogation_Position=343; Antisense; ATCCCCAAGGTGTCCTGGACGAAGT
>probe:Drosophila_2:1628516_at:29:383; Interrogation_Position=60; Antisense; GAACGATTCGGATCTCAAGAAGAAA

Paste this into a BLAST search page for me
GAAGGCGTTCGTGGAGCAGCAAATAATGTCCGACGAGTACGCCTGCGTGGCCACCAGTGGCTACGAGCGGAAGCTACGAGCGGAAGCTCACCAAGGCCGAGCCGAGCTGGCCAGTAAGAAGCAGCCGCAACAAGCGAATCATGGACAAGGATGGACAAGGCACAAACCACCCACAAAACCACCCACAAGGAGCGCGTGGAGAGAAATTCAACGAGCACCTGGACATGGACACGCTCACCGAGCACTTTGAGAGCACTTTGACATCCCCAAGGTGTGTGGCCAAGGGCAAGCTTAAACTAAATCCCCAAGGTGTCCTGGACGAAGTGAACGATTCGGATCTCAAGAAGAAA

Full Affymetrix probeset data:

Annotations for 1628516_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720