FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628548_at:

>probe:Drosophila_2:1628548_at:595:281; Interrogation_Position=7773; Antisense; CTCCCGATCGTGTGTAGCCAAATGT
>probe:Drosophila_2:1628548_at:94:165; Interrogation_Position=7816; Antisense; AAATCAGGCCTTTCAACATGTGTAC
>probe:Drosophila_2:1628548_at:398:11; Interrogation_Position=7892; Antisense; ATTCGATTGTCGCATTAACTAGGAA
>probe:Drosophila_2:1628548_at:666:75; Interrogation_Position=7917; Antisense; AGGTTTACCAAGTCGAATGTCTGTT
>probe:Drosophila_2:1628548_at:497:501; Interrogation_Position=7928; Antisense; GTCGAATGTCTGTTCTGATTTAACT
>probe:Drosophila_2:1628548_at:285:93; Interrogation_Position=7965; Antisense; AGTTAGATGAGCTGTCCTCCAACTG
>probe:Drosophila_2:1628548_at:209:505; Interrogation_Position=7978; Antisense; GTCCTCCAACTGGTGAGCTACTGAA
>probe:Drosophila_2:1628548_at:439:21; Interrogation_Position=8016; Antisense; ATATAGTTGCACATCTTTATTGAGA
>probe:Drosophila_2:1628548_at:515:163; Interrogation_Position=8057; Antisense; AAATATGCCCCTGGCTTCCTTATGC
>probe:Drosophila_2:1628548_at:195:571; Interrogation_Position=8069; Antisense; GGCTTCCTTATGCAAACACCAAATA
>probe:Drosophila_2:1628548_at:721:395; Interrogation_Position=8107; Antisense; GAAATTCACATTTTTTAGTCACTGC
>probe:Drosophila_2:1628548_at:344:345; Interrogation_Position=8195; Antisense; GCATTAAGCTCATCATTTGCGACTT
>probe:Drosophila_2:1628548_at:189:717; Interrogation_Position=8211; Antisense; TTGCGACTTAGTTTTTACCGATTCA
>probe:Drosophila_2:1628548_at:579:705; Interrogation_Position=8225; Antisense; TTACCGATTCAATGCGATTAACCAT

Paste this into a BLAST search page for me
CTCCCGATCGTGTGTAGCCAAATGTAAATCAGGCCTTTCAACATGTGTACATTCGATTGTCGCATTAACTAGGAAAGGTTTACCAAGTCGAATGTCTGTTGTCGAATGTCTGTTCTGATTTAACTAGTTAGATGAGCTGTCCTCCAACTGGTCCTCCAACTGGTGAGCTACTGAAATATAGTTGCACATCTTTATTGAGAAAATATGCCCCTGGCTTCCTTATGCGGCTTCCTTATGCAAACACCAAATAGAAATTCACATTTTTTAGTCACTGCGCATTAAGCTCATCATTTGCGACTTTTGCGACTTAGTTTTTACCGATTCATTACCGATTCAATGCGATTAACCAT

Full Affymetrix probeset data:

Annotations for 1628548_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720