FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628694_a_at:

>probe:Drosophila_2:1628694_a_at:194:679; Interrogation_Position=1016; Antisense; TATGGACGTCCGATATGCAGGCAGA
>probe:Drosophila_2:1628694_a_at:535:575; Interrogation_Position=1066; Antisense; GGCGAGCCCAAAGAGCAAATCCAGG
>probe:Drosophila_2:1628694_a_at:672:435; Interrogation_Position=1096; Antisense; GAGGATCAGGACGTGTCGTAATTTA
>probe:Drosophila_2:1628694_a_at:141:279; Interrogation_Position=1131; Antisense; CGCCCTTCCATTTAAAACACATTAT
>probe:Drosophila_2:1628694_a_at:544:159; Interrogation_Position=1249; Antisense; ACAACATGGAACCAATGCGGCAACA
>probe:Drosophila_2:1628694_a_at:143:27; Interrogation_Position=1280; Antisense; ATAGCAGTCGATCACCACAACAGCA
>probe:Drosophila_2:1628694_a_at:490:351; Interrogation_Position=1302; Antisense; GCAGCACCCGTATGTGTATCAACAT
>probe:Drosophila_2:1628694_a_at:331:209; Interrogation_Position=1352; Antisense; AAGCAGCAGGAACACAAATTGTCAT
>probe:Drosophila_2:1628694_a_at:617:229; Interrogation_Position=1441; Antisense; AATGTTTGAAAATTGGGCGGCCTGG
>probe:Drosophila_2:1628694_a_at:483:173; Interrogation_Position=913; Antisense; AAAGCCGCTTTCGATGATGCCATTG
>probe:Drosophila_2:1628694_a_at:180:49; Interrogation_Position=929; Antisense; ATGCCATTGCCGAGTTGGATACACT
>probe:Drosophila_2:1628694_a_at:234:455; Interrogation_Position=946; Antisense; GATACACTGAGCGAAGAGAGCTACA
>probe:Drosophila_2:1628694_a_at:558:417; Interrogation_Position=963; Antisense; GAGCTACAAAGACTCGACACTCATC
>probe:Drosophila_2:1628694_a_at:200:623; Interrogation_Position=998; Antisense; TGCGCGACAACCTCACATTATGGAC

Paste this into a BLAST search page for me
TATGGACGTCCGATATGCAGGCAGAGGCGAGCCCAAAGAGCAAATCCAGGGAGGATCAGGACGTGTCGTAATTTACGCCCTTCCATTTAAAACACATTATACAACATGGAACCAATGCGGCAACAATAGCAGTCGATCACCACAACAGCAGCAGCACCCGTATGTGTATCAACATAAGCAGCAGGAACACAAATTGTCATAATGTTTGAAAATTGGGCGGCCTGGAAAGCCGCTTTCGATGATGCCATTGATGCCATTGCCGAGTTGGATACACTGATACACTGAGCGAAGAGAGCTACAGAGCTACAAAGACTCGACACTCATCTGCGCGACAACCTCACATTATGGAC

Full Affymetrix probeset data:

Annotations for 1628694_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720