FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628726_s_at:

>probe:Drosophila_2:1628726_s_at:717:423; Interrogation_Position=3300; Antisense; GAGACTCTACTGGAATATTTGCTGA
>probe:Drosophila_2:1628726_s_at:708:479; Interrogation_Position=3425; Antisense; GTTTGTTTAAGGATTCTCATTGTCT
>probe:Drosophila_2:1628726_s_at:597:541; Interrogation_Position=3435; Antisense; GGATTCTCATTGTCTGTACTTAACT
>probe:Drosophila_2:1628726_s_at:487:499; Interrogation_Position=3446; Antisense; GTCTGTACTTAACTTTGAGGTCTTA
>probe:Drosophila_2:1628726_s_at:416:439; Interrogation_Position=3501; Antisense; GATGTTTTTACCCACAGTACGTGTA
>probe:Drosophila_2:1628726_s_at:547:491; Interrogation_Position=3559; Antisense; GTAACATTTTTCGAGTGGAGTGCAC
>probe:Drosophila_2:1628726_s_at:418:635; Interrogation_Position=3569; Antisense; TCGAGTGGAGTGCACAACAACAAAT
>probe:Drosophila_2:1628726_s_at:478:3; Interrogation_Position=3594; Antisense; ATTGTTTTATCGATACTTTAGCCGT
>probe:Drosophila_2:1628726_s_at:395:135; Interrogation_Position=3608; Antisense; ACTTTAGCCGTATAAGATACCGTAT
>probe:Drosophila_2:1628726_s_at:324:457; Interrogation_Position=3623; Antisense; GATACCGTATTTCAGATTCTCTAAG
>probe:Drosophila_2:1628726_s_at:683:461; Interrogation_Position=3637; Antisense; GATTCTCTAAGTTATCTACATTGAA
>probe:Drosophila_2:1628726_s_at:617:667; Interrogation_Position=3693; Antisense; TACGGTATACACTAAGAATCTGCTT
>probe:Drosophila_2:1628726_s_at:342:209; Interrogation_Position=3706; Antisense; AAGAATCTGCTTTGATTTATACATA
>probe:Drosophila_2:1628726_s_at:378:237; Interrogation_Position=3817; Antisense; AATCGATAATTTGTGTTCTTCTGAA

Paste this into a BLAST search page for me
GAGACTCTACTGGAATATTTGCTGAGTTTGTTTAAGGATTCTCATTGTCTGGATTCTCATTGTCTGTACTTAACTGTCTGTACTTAACTTTGAGGTCTTAGATGTTTTTACCCACAGTACGTGTAGTAACATTTTTCGAGTGGAGTGCACTCGAGTGGAGTGCACAACAACAAATATTGTTTTATCGATACTTTAGCCGTACTTTAGCCGTATAAGATACCGTATGATACCGTATTTCAGATTCTCTAAGGATTCTCTAAGTTATCTACATTGAATACGGTATACACTAAGAATCTGCTTAAGAATCTGCTTTGATTTATACATAAATCGATAATTTGTGTTCTTCTGAA

Full Affymetrix probeset data:

Annotations for 1628726_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720