FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628788_a_at:

>probe:Drosophila_2:1628788_a_at:91:567; Interrogation_Position=2307; Antisense; GGCAACAATACCAACGATCAGGACG
>probe:Drosophila_2:1628788_a_at:131:449; Interrogation_Position=2322; Antisense; GATCAGGACGTATCCGTATTTAATT
>probe:Drosophila_2:1628788_a_at:686:391; Interrogation_Position=2357; Antisense; GAAACCTTTCTTTTTGCAATCAAAT
>probe:Drosophila_2:1628788_a_at:529:137; Interrogation_Position=2412; Antisense; ACGATTATTCTTTTTTATATACGAG
>probe:Drosophila_2:1628788_a_at:163:27; Interrogation_Position=2430; Antisense; ATACGAGTATACAAAGCAAGCAAAC
>probe:Drosophila_2:1628788_a_at:167:387; Interrogation_Position=2557; Antisense; GAAAAGAACGCTAAACACCCAGCCG
>probe:Drosophila_2:1628788_a_at:134:309; Interrogation_Position=2575; Antisense; CCAGCCGCAACGAGTCAAGGATCAG
>probe:Drosophila_2:1628788_a_at:136:455; Interrogation_Position=2624; Antisense; GATCAGCACAGGGATATCCGTGTCC
>probe:Drosophila_2:1628788_a_at:241:267; Interrogation_Position=2632; Antisense; CAGGGATATCCGTGTCCGGCAGCAA
>probe:Drosophila_2:1628788_a_at:224:501; Interrogation_Position=2645; Antisense; GTCCGGCAGCAATCGGTTGTGGACC
>probe:Drosophila_2:1628788_a_at:666:541; Interrogation_Position=2659; Antisense; GGTTGTGGACCCGATCAGATCAGAT
>probe:Drosophila_2:1628788_a_at:27:413; Interrogation_Position=2666; Antisense; GACCCGATCAGATCAGATCAACTGA
>probe:Drosophila_2:1628788_a_at:693:21; Interrogation_Position=2732; Antisense; ATATATATGGATGATGCGGAGCGGA
>probe:Drosophila_2:1628788_a_at:24:345; Interrogation_Position=2777; Antisense; GCATGACGGGCGAGAATGATTTTGA

Paste this into a BLAST search page for me
GGCAACAATACCAACGATCAGGACGGATCAGGACGTATCCGTATTTAATTGAAACCTTTCTTTTTGCAATCAAATACGATTATTCTTTTTTATATACGAGATACGAGTATACAAAGCAAGCAAACGAAAAGAACGCTAAACACCCAGCCGCCAGCCGCAACGAGTCAAGGATCAGGATCAGCACAGGGATATCCGTGTCCCAGGGATATCCGTGTCCGGCAGCAAGTCCGGCAGCAATCGGTTGTGGACCGGTTGTGGACCCGATCAGATCAGATGACCCGATCAGATCAGATCAACTGAATATATATGGATGATGCGGAGCGGAGCATGACGGGCGAGAATGATTTTGA

Full Affymetrix probeset data:

Annotations for 1628788_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720