FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628834_a_at:

>probe:Drosophila_2:1628834_a_at:475:337; Interrogation_Position=1324; Antisense; GCTCGCCTCATGCACAAGTACAATG
>probe:Drosophila_2:1628834_a_at:711:139; Interrogation_Position=1352; Antisense; ACGGAGCCACCGATATTACTGGATT
>probe:Drosophila_2:1628834_a_at:681:587; Interrogation_Position=1371; Antisense; TGGATTCGGACTACTAGGCCACGCT
>probe:Drosophila_2:1628834_a_at:202:225; Interrogation_Position=1420; Antisense; AAGGATGTCTCCTTTGTTATCCACA
>probe:Drosophila_2:1628834_a_at:274:727; Interrogation_Position=1433; Antisense; TTGTTATCCACAATCTGCCGGTGAT
>probe:Drosophila_2:1628834_a_at:349:175; Interrogation_Position=1480; Antisense; AAAGCCTGCGGCAACATGTTCCAGC
>probe:Drosophila_2:1628834_a_at:465:549; Interrogation_Position=1534; Antisense; GGAGGATTACTGATCTGCCTGCCGC
>probe:Drosophila_2:1628834_a_at:116:349; Interrogation_Position=1563; Antisense; GCAGGCCGCTGCTTATTGCAAGGAC
>probe:Drosophila_2:1628834_a_at:719:81; Interrogation_Position=1637; Antisense; AGGGCAATAAGACCGCACGCATCAT
>probe:Drosophila_2:1628834_a_at:151:301; Interrogation_Position=1673; Antisense; GCGTCATTGAGGTGCCCGCCAAGGA
>probe:Drosophila_2:1628834_a_at:178:225; Interrogation_Position=1693; Antisense; AAGGACTAGGTCTCCATTGCCTGAC
>probe:Drosophila_2:1628834_a_at:558:127; Interrogation_Position=1716; Antisense; ACCATCTGCTATTGTCTACCTTAAG
>probe:Drosophila_2:1628834_a_at:332:289; Interrogation_Position=1783; Antisense; CGGCATGATCGGTCTTTGTTTTTTA
>probe:Drosophila_2:1628834_a_at:56:655; Interrogation_Position=1845; Antisense; TAATCTTGGACGTCTCTACTGCAAT

Paste this into a BLAST search page for me
GCTCGCCTCATGCACAAGTACAATGACGGAGCCACCGATATTACTGGATTTGGATTCGGACTACTAGGCCACGCTAAGGATGTCTCCTTTGTTATCCACATTGTTATCCACAATCTGCCGGTGATAAAGCCTGCGGCAACATGTTCCAGCGGAGGATTACTGATCTGCCTGCCGCGCAGGCCGCTGCTTATTGCAAGGACAGGGCAATAAGACCGCACGCATCATGCGTCATTGAGGTGCCCGCCAAGGAAAGGACTAGGTCTCCATTGCCTGACACCATCTGCTATTGTCTACCTTAAGCGGCATGATCGGTCTTTGTTTTTTATAATCTTGGACGTCTCTACTGCAAT

Full Affymetrix probeset data:

Annotations for 1628834_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720