FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628842_s_at:

>probe:Drosophila_2:1628842_s_at:546:167; Interrogation_Position=3270; Antisense; AAATGAGTTCCAAAGAGTCTGCATA
>probe:Drosophila_2:1628842_s_at:414:431; Interrogation_Position=3284; Antisense; GAGTCTGCATATATGGCTGCAGGCA
>probe:Drosophila_2:1628842_s_at:304:335; Interrogation_Position=3299; Antisense; GCTGCAGGCATAATTGTAAAGACGT
>probe:Drosophila_2:1628842_s_at:579:495; Interrogation_Position=3388; Antisense; GTCAGTGAAAGTGCATAACACATCA
>probe:Drosophila_2:1628842_s_at:451:245; Interrogation_Position=3467; Antisense; AATTATTATGTAACCAGCGTCGCTA
>probe:Drosophila_2:1628842_s_at:402:129; Interrogation_Position=3479; Antisense; ACCAGCGTCGCTAGATCCATAAATA
>probe:Drosophila_2:1628842_s_at:342:243; Interrogation_Position=3546; Antisense; AATTTATAGTTTGTCAGCCCTCACC
>probe:Drosophila_2:1628842_s_at:491:495; Interrogation_Position=3558; Antisense; GTCAGCCCTCACCTTAAGATGTAAA
>probe:Drosophila_2:1628842_s_at:94:353; Interrogation_Position=3585; Antisense; GCACATGTCTACCAAATTTCAACTG
>probe:Drosophila_2:1628842_s_at:416:697; Interrogation_Position=3601; Antisense; TTTCAACTGAATTCTGTCGCAATGC
>probe:Drosophila_2:1628842_s_at:681:283; Interrogation_Position=3614; Antisense; CTGTCGCAATGCATAGGAGGAAGTT
>probe:Drosophila_2:1628842_s_at:171:679; Interrogation_Position=3627; Antisense; TAGGAGGAAGTTTCTCCGTCCCAAT
>probe:Drosophila_2:1628842_s_at:643:715; Interrogation_Position=3638; Antisense; TTCTCCGTCCCAATAATTTAAGCCT
>probe:Drosophila_2:1628842_s_at:325:583; Interrogation_Position=3691; Antisense; TGGATCGTAATACCCAAACAATGTT

Paste this into a BLAST search page for me
AAATGAGTTCCAAAGAGTCTGCATAGAGTCTGCATATATGGCTGCAGGCAGCTGCAGGCATAATTGTAAAGACGTGTCAGTGAAAGTGCATAACACATCAAATTATTATGTAACCAGCGTCGCTAACCAGCGTCGCTAGATCCATAAATAAATTTATAGTTTGTCAGCCCTCACCGTCAGCCCTCACCTTAAGATGTAAAGCACATGTCTACCAAATTTCAACTGTTTCAACTGAATTCTGTCGCAATGCCTGTCGCAATGCATAGGAGGAAGTTTAGGAGGAAGTTTCTCCGTCCCAATTTCTCCGTCCCAATAATTTAAGCCTTGGATCGTAATACCCAAACAATGTT

Full Affymetrix probeset data:

Annotations for 1628842_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720