FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628867_s_at:

>probe:Drosophila_2:1628867_s_at:605:239; Interrogation_Position=2091; Antisense; AATAGCCACCAGCTGTGACGTCATA
>probe:Drosophila_2:1628867_s_at:182:185; Interrogation_Position=2153; Antisense; AAAATGGTGAGAACTCCTCCCAGGG
>probe:Drosophila_2:1628867_s_at:688:413; Interrogation_Position=2209; Antisense; GAGCAGGAACCCAGCGACACCGAGT
>probe:Drosophila_2:1628867_s_at:715:431; Interrogation_Position=2230; Antisense; GAGTCCAATCACACGATCGAGGTCA
>probe:Drosophila_2:1628867_s_at:704:317; Interrogation_Position=2302; Antisense; GCCGTGTGAGCGGTCAAAACTTTCT
>probe:Drosophila_2:1628867_s_at:533:97; Interrogation_Position=2335; Antisense; AGATCTTCCAATTTTGTGGCTGTAT
>probe:Drosophila_2:1628867_s_at:489:521; Interrogation_Position=2350; Antisense; GTGGCTGTATTCTTCGAGATCCCCA
>probe:Drosophila_2:1628867_s_at:447:427; Interrogation_Position=2365; Antisense; GAGATCCCCAGGAGTGGATGTTCCA
>probe:Drosophila_2:1628867_s_at:257:547; Interrogation_Position=2380; Antisense; GGATGTTCCAGGACCAAGGATGTGT
>probe:Drosophila_2:1628867_s_at:580:63; Interrogation_Position=2399; Antisense; ATGTGTGTGTGATCCCGGGTGCTTT
>probe:Drosophila_2:1628867_s_at:432:507; Interrogation_Position=2417; Antisense; GTGCTTTTGGTGCTTCATGTGCTGC
>probe:Drosophila_2:1628867_s_at:526:507; Interrogation_Position=2435; Antisense; GTGCTGCCCTCTGTATCGCTGGATA
>probe:Drosophila_2:1628867_s_at:617:543; Interrogation_Position=2455; Antisense; GGATACGGAAATCGAACCACTCAAT
>probe:Drosophila_2:1628867_s_at:685:127; Interrogation_Position=2470; Antisense; ACCACTCAATCAAATCGCTCAAAGC

Paste this into a BLAST search page for me
AATAGCCACCAGCTGTGACGTCATAAAAATGGTGAGAACTCCTCCCAGGGGAGCAGGAACCCAGCGACACCGAGTGAGTCCAATCACACGATCGAGGTCAGCCGTGTGAGCGGTCAAAACTTTCTAGATCTTCCAATTTTGTGGCTGTATGTGGCTGTATTCTTCGAGATCCCCAGAGATCCCCAGGAGTGGATGTTCCAGGATGTTCCAGGACCAAGGATGTGTATGTGTGTGTGATCCCGGGTGCTTTGTGCTTTTGGTGCTTCATGTGCTGCGTGCTGCCCTCTGTATCGCTGGATAGGATACGGAAATCGAACCACTCAATACCACTCAATCAAATCGCTCAAAGC

Full Affymetrix probeset data:

Annotations for 1628867_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720