FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628887_a_at:

>probe:Drosophila_2:1628887_a_at:604:197; Interrogation_Position=1249; Antisense; AACGTGAGGCGTTGCAGTTCATGCG
>probe:Drosophila_2:1628887_a_at:318:57; Interrogation_Position=1278; Antisense; ATGATGGACGAGTGCACCCACCTGA
>probe:Drosophila_2:1628887_a_at:569:351; Interrogation_Position=1291; Antisense; GCACCCACCTGAAGAACTTTTCGGT
>probe:Drosophila_2:1628887_a_at:147:399; Interrogation_Position=1323; Antisense; GACACCTCCCTGATAATTGCGGTAT
>probe:Drosophila_2:1628887_a_at:314:215; Interrogation_Position=1354; Antisense; AAGATGATGCCTATGTGCCGCGGGA
>probe:Drosophila_2:1628887_a_at:595:579; Interrogation_Position=1404; Antisense; TGGCCAGGAGCAGAAGTACGTTACT
>probe:Drosophila_2:1628887_a_at:480:89; Interrogation_Position=1418; Antisense; AGTACGTTACTTGGATGCCGGCCAT
>probe:Drosophila_2:1628887_a_at:696:609; Interrogation_Position=1444; Antisense; TGAGCGCCTACGTTCTGCATCAGAA
>probe:Drosophila_2:1628887_a_at:7:375; Interrogation_Position=1466; Antisense; GAAGCTATTTAGATCCTGCATTATT
>probe:Drosophila_2:1628887_a_at:31:17; Interrogation_Position=1485; Antisense; ATTATTGAGGCTTTCGAGCGGGCAA
>probe:Drosophila_2:1628887_a_at:11:577; Interrogation_Position=1533; Antisense; GGCGAGGGCCTGAAATGTGATATAA
>probe:Drosophila_2:1628887_a_at:515:367; Interrogation_Position=1718; Antisense; GAATGGAAACTGGTTCCCCATATAT
>probe:Drosophila_2:1628887_a_at:151:655; Interrogation_Position=1747; Antisense; TAATTTATATTACCACGCCCACCAA
>probe:Drosophila_2:1628887_a_at:681:29; Interrogation_Position=1795; Antisense; ATAAACGCCAGTGAGCTAGTGAGCT

Paste this into a BLAST search page for me
AACGTGAGGCGTTGCAGTTCATGCGATGATGGACGAGTGCACCCACCTGAGCACCCACCTGAAGAACTTTTCGGTGACACCTCCCTGATAATTGCGGTATAAGATGATGCCTATGTGCCGCGGGATGGCCAGGAGCAGAAGTACGTTACTAGTACGTTACTTGGATGCCGGCCATTGAGCGCCTACGTTCTGCATCAGAAGAAGCTATTTAGATCCTGCATTATTATTATTGAGGCTTTCGAGCGGGCAAGGCGAGGGCCTGAAATGTGATATAAGAATGGAAACTGGTTCCCCATATATTAATTTATATTACCACGCCCACCAAATAAACGCCAGTGAGCTAGTGAGCT

Full Affymetrix probeset data:

Annotations for 1628887_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720