FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628915_s_at:

>probe:Drosophila_2:1628915_s_at:659:103; Interrogation_Position=2970; Antisense; AGACGCCCGGCGAGAAGCTCTACGA
>probe:Drosophila_2:1628915_s_at:682:141; Interrogation_Position=3003; Antisense; ACTGTCCTCAGGTGGTGGCTAAGCA
>probe:Drosophila_2:1628915_s_at:319:583; Interrogation_Position=3018; Antisense; TGGCTAAGCACAGCTATGAGTCCGA
>probe:Drosophila_2:1628915_s_at:294:57; Interrogation_Position=3033; Antisense; ATGAGTCCGACGAGCCAGATGTTCT
>probe:Drosophila_2:1628915_s_at:437:407; Interrogation_Position=3041; Antisense; GACGAGCCAGATGTTCTTCAACTTG
>probe:Drosophila_2:1628915_s_at:216:275; Interrogation_Position=3056; Antisense; CTTCAACTTGAACTGGGCGACGTAG
>probe:Drosophila_2:1628915_s_at:287:407; Interrogation_Position=3074; Antisense; GACGTAGTCAATGTTTCCCGCAAAC
>probe:Drosophila_2:1628915_s_at:137:99; Interrogation_Position=3133; Antisense; AGATGGAGCCGTAGGTTGGTTCCCT
>probe:Drosophila_2:1628915_s_at:582:589; Interrogation_Position=3149; Antisense; TGGTTCCCTGGAAGCTACACTGAGG
>probe:Drosophila_2:1628915_s_at:97:247; Interrogation_Position=3179; Antisense; AATTCAGCCCATGTGCGAGCGCGGA
>probe:Drosophila_2:1628915_s_at:232:579; Interrogation_Position=3238; Antisense; GGCCACCTACCTGGAGTCGCAAAAG
>probe:Drosophila_2:1628915_s_at:15:513; Interrogation_Position=3268; Antisense; GTGACTTCCGGCTGCTCTTGGAAAA
>probe:Drosophila_2:1628915_s_at:475:687; Interrogation_Position=3302; Antisense; TATTAACTAGCAACGCCAACTCCAT
>probe:Drosophila_2:1628915_s_at:708:23; Interrogation_Position=3325; Antisense; ATAGTCCGCAACCAATAGCCGTACA

Paste this into a BLAST search page for me
AGACGCCCGGCGAGAAGCTCTACGAACTGTCCTCAGGTGGTGGCTAAGCATGGCTAAGCACAGCTATGAGTCCGAATGAGTCCGACGAGCCAGATGTTCTGACGAGCCAGATGTTCTTCAACTTGCTTCAACTTGAACTGGGCGACGTAGGACGTAGTCAATGTTTCCCGCAAACAGATGGAGCCGTAGGTTGGTTCCCTTGGTTCCCTGGAAGCTACACTGAGGAATTCAGCCCATGTGCGAGCGCGGAGGCCACCTACCTGGAGTCGCAAAAGGTGACTTCCGGCTGCTCTTGGAAAATATTAACTAGCAACGCCAACTCCATATAGTCCGCAACCAATAGCCGTACA

Full Affymetrix probeset data:

Annotations for 1628915_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720