FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628921_s_at:

>probe:Drosophila_2:1628921_s_at:300:601; Interrogation_Position=1234; Antisense; TGTACCGCTCCAATCTTAAGTTCTT
>probe:Drosophila_2:1628921_s_at:244:47; Interrogation_Position=1275; Antisense; ATCCTGTACTGGGAGTGCGTCCAAA
>probe:Drosophila_2:1628921_s_at:417:219; Interrogation_Position=1311; Antisense; AAGTGCCGCAGTCGCTTAAAGACCA
>probe:Drosophila_2:1628921_s_at:312:573; Interrogation_Position=1338; Antisense; GGCGATGATCTCTATGTAACCAATG
>probe:Drosophila_2:1628921_s_at:694:509; Interrogation_Position=1365; Antisense; GTGCACAATCACATGGGCGACAACA
>probe:Drosophila_2:1628921_s_at:459:227; Interrogation_Position=1407; Antisense; AAGGCGGCTGGGATGCTGATCCACA
>probe:Drosophila_2:1628921_s_at:308:211; Interrogation_Position=1431; Antisense; AAGAAGTTGAGTTCCCTCACAGCCG
>probe:Drosophila_2:1628921_s_at:298:155; Interrogation_Position=1449; Antisense; ACAGCCGCCGACAAAATCCAGGGTT
>probe:Drosophila_2:1628921_s_at:110:99; Interrogation_Position=1516; Antisense; AGATGTAGCCGCTTCCTATACATTC
>probe:Drosophila_2:1628921_s_at:28:257; Interrogation_Position=1547; Antisense; CAAACGTTCGTGTTCTGTTAGGGCT
>probe:Drosophila_2:1628921_s_at:292:607; Interrogation_Position=1622; Antisense; TGAGTGTCCCGAGCCTAGTTAGGAT
>probe:Drosophila_2:1628921_s_at:31:525; Interrogation_Position=1647; Antisense; GGGTAAGTAGCCTGTTCATCTGGGA
>probe:Drosophila_2:1628921_s_at:720:1; Interrogation_Position=1732; Antisense; ATTGCTTAGACGCTTTTGGCCACGG
>probe:Drosophila_2:1628921_s_at:48:581; Interrogation_Position=1748; Antisense; TGGCCACGGCACTGACTTAAACAAT

Paste this into a BLAST search page for me
TGTACCGCTCCAATCTTAAGTTCTTATCCTGTACTGGGAGTGCGTCCAAAAAGTGCCGCAGTCGCTTAAAGACCAGGCGATGATCTCTATGTAACCAATGGTGCACAATCACATGGGCGACAACAAAGGCGGCTGGGATGCTGATCCACAAAGAAGTTGAGTTCCCTCACAGCCGACAGCCGCCGACAAAATCCAGGGTTAGATGTAGCCGCTTCCTATACATTCCAAACGTTCGTGTTCTGTTAGGGCTTGAGTGTCCCGAGCCTAGTTAGGATGGGTAAGTAGCCTGTTCATCTGGGAATTGCTTAGACGCTTTTGGCCACGGTGGCCACGGCACTGACTTAAACAAT

Full Affymetrix probeset data:

Annotations for 1628921_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720