FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628937_s_at:

>probe:Drosophila_2:1628937_s_at:350:657; Interrogation_Position=3644; Antisense; TAAGATCACGATAAGCAAAGCAAGC
>probe:Drosophila_2:1628937_s_at:681:239; Interrogation_Position=3716; Antisense; AATCAATTGAGCACCAAGCCGCAAG
>probe:Drosophila_2:1628937_s_at:219:187; Interrogation_Position=3757; Antisense; AACACAAACACACATCGACGTCGAC
>probe:Drosophila_2:1628937_s_at:64:409; Interrogation_Position=3773; Antisense; GACGTCGACGTTTAGCGCCCCAGAA
>probe:Drosophila_2:1628937_s_at:719:295; Interrogation_Position=3791; Antisense; CCCAGAAAGAAAGTCCGCCGCATTT
>probe:Drosophila_2:1628937_s_at:96:633; Interrogation_Position=3804; Antisense; TCCGCCGCATTTTAGAGCCTGTAAA
>probe:Drosophila_2:1628937_s_at:48:413; Interrogation_Position=3818; Antisense; GAGCCTGTAAACCTTTTGCTACTTA
>probe:Drosophila_2:1628937_s_at:566:233; Interrogation_Position=3843; Antisense; AATCTAATTTGCAGACTAGCTAGTC
>probe:Drosophila_2:1628937_s_at:730:497; Interrogation_Position=3865; Antisense; GTCTATATAGGTATCGTATCGGTTC
>probe:Drosophila_2:1628937_s_at:440:611; Interrogation_Position=3876; Antisense; TATCGTATCGGTTCGAAACGGTTCG
>probe:Drosophila_2:1628937_s_at:654:291; Interrogation_Position=3995; Antisense; CGATGCAATCGATGGTCAGGAATAA
>probe:Drosophila_2:1628937_s_at:527:553; Interrogation_Position=4030; Antisense; GGACGGTCAGTGTTTTCGCTTTTCT
>probe:Drosophila_2:1628937_s_at:226:343; Interrogation_Position=4047; Antisense; GCTTTTCTTTTATTCGTTCTGTGTA
>probe:Drosophila_2:1628937_s_at:306:283; Interrogation_Position=4065; Antisense; CTGTGTAATAAGTTCAAGGTCGTAA

Paste this into a BLAST search page for me
TAAGATCACGATAAGCAAAGCAAGCAATCAATTGAGCACCAAGCCGCAAGAACACAAACACACATCGACGTCGACGACGTCGACGTTTAGCGCCCCAGAACCCAGAAAGAAAGTCCGCCGCATTTTCCGCCGCATTTTAGAGCCTGTAAAGAGCCTGTAAACCTTTTGCTACTTAAATCTAATTTGCAGACTAGCTAGTCGTCTATATAGGTATCGTATCGGTTCTATCGTATCGGTTCGAAACGGTTCGCGATGCAATCGATGGTCAGGAATAAGGACGGTCAGTGTTTTCGCTTTTCTGCTTTTCTTTTATTCGTTCTGTGTACTGTGTAATAAGTTCAAGGTCGTAA

Full Affymetrix probeset data:

Annotations for 1628937_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720