FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628948_a_at:

>probe:Drosophila_2:1628948_a_at:82:411; Interrogation_Position=2566; Antisense; GACGCAGCCTGGAGCGACGCAACAG
>probe:Drosophila_2:1628948_a_at:335:411; Interrogation_Position=2581; Antisense; GACGCAACAGCGAATCGGAGATGTC
>probe:Drosophila_2:1628948_a_at:213:123; Interrogation_Position=2589; Antisense; AGCGAATCGGAGATGTCCGGCGATT
>probe:Drosophila_2:1628948_a_at:616:441; Interrogation_Position=2600; Antisense; GATGTCCGGCGATTGTGCAGCCGAA
>probe:Drosophila_2:1628948_a_at:665:615; Interrogation_Position=2615; Antisense; TGCAGCCGAAGGTGATGCACTGCTC
>probe:Drosophila_2:1628948_a_at:522:223; Interrogation_Position=2623; Antisense; AAGGTGATGCACTGCTCGGCGGCAC
>probe:Drosophila_2:1628948_a_at:528:143; Interrogation_Position=2633; Antisense; ACTGCTCGGCGGCACAACGGACGCA
>probe:Drosophila_2:1628948_a_at:390:253; Interrogation_Position=2645; Antisense; CACAACGGACGCACTGGCGCTGAGC
>probe:Drosophila_2:1628948_a_at:446:575; Interrogation_Position=2660; Antisense; GGCGCTGAGCGGTGGCGGAGCATCC
>probe:Drosophila_2:1628948_a_at:396:347; Interrogation_Position=2679; Antisense; GCATCCGGCGGAACCGGCAGTGCAA
>probe:Drosophila_2:1628948_a_at:523:201; Interrogation_Position=2690; Antisense; AACCGGCAGTGCAACCGGTGCAGCA
>probe:Drosophila_2:1628948_a_at:571:113; Interrogation_Position=2711; Antisense; AGCAGGTTCCGGTTCAGGATCTGGC
>probe:Drosophila_2:1628948_a_at:270:329; Interrogation_Position=2734; Antisense; GCGGCGGTGCCGGTGATTTTTTCCT
>probe:Drosophila_2:1628948_a_at:395:305; Interrogation_Position=2743; Antisense; CCGGTGATTTTTTCCTCTTCAGCAG

Paste this into a BLAST search page for me
GACGCAGCCTGGAGCGACGCAACAGGACGCAACAGCGAATCGGAGATGTCAGCGAATCGGAGATGTCCGGCGATTGATGTCCGGCGATTGTGCAGCCGAATGCAGCCGAAGGTGATGCACTGCTCAAGGTGATGCACTGCTCGGCGGCACACTGCTCGGCGGCACAACGGACGCACACAACGGACGCACTGGCGCTGAGCGGCGCTGAGCGGTGGCGGAGCATCCGCATCCGGCGGAACCGGCAGTGCAAAACCGGCAGTGCAACCGGTGCAGCAAGCAGGTTCCGGTTCAGGATCTGGCGCGGCGGTGCCGGTGATTTTTTCCTCCGGTGATTTTTTCCTCTTCAGCAG

Full Affymetrix probeset data:

Annotations for 1628948_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720