FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628960_s_at:

>probe:Drosophila_2:1628960_s_at:565:251; Interrogation_Position=1694; Antisense; CAAGGAGTCAGCCACTCTGGGAATT
>probe:Drosophila_2:1628960_s_at:365:531; Interrogation_Position=1742; Antisense; GGGTGTTGAATTCTGCAGCACTTAT
>probe:Drosophila_2:1628960_s_at:228:371; Interrogation_Position=1771; Antisense; GAAGGCCATTTCTCATTGCTTGTAT
>probe:Drosophila_2:1628960_s_at:644:273; Interrogation_Position=1784; Antisense; CATTGCTTGTATTGCTGTCATTGAA
>probe:Drosophila_2:1628960_s_at:422:3; Interrogation_Position=1845; Antisense; ATTGTGCCTCACTTTTTTAATTTCA
>probe:Drosophila_2:1628960_s_at:630:645; Interrogation_Position=1895; Antisense; TCAGTTTTCATTTACGTTTCGCACC
>probe:Drosophila_2:1628960_s_at:545:693; Interrogation_Position=1911; Antisense; TTTCGCACCTTTGTATTCGGTTCTT
>probe:Drosophila_2:1628960_s_at:90:389; Interrogation_Position=1960; Antisense; GAAAAACTGCCTTCACTTGTTCGCT
>probe:Drosophila_2:1628960_s_at:172:651; Interrogation_Position=1972; Antisense; TCACTTGTTCGCTGGCCATATATTT
>probe:Drosophila_2:1628960_s_at:431:579; Interrogation_Position=1985; Antisense; GGCCATATATTTTAATTCTCCTCCA
>probe:Drosophila_2:1628960_s_at:150:677; Interrogation_Position=2018; Antisense; TAGATCGAATCCTTTAACCCCAAAG
>probe:Drosophila_2:1628960_s_at:642:15; Interrogation_Position=2117; Antisense; ATTATCATATCGTACGTGCGCGCCT
>probe:Drosophila_2:1628960_s_at:559:275; Interrogation_Position=2143; Antisense; CTTCTCTTTGCCCAGAATTTCTATA
>probe:Drosophila_2:1628960_s_at:213:221; Interrogation_Position=2178; Antisense; AAGTGACTTGACTTCATTTCTTAAG

Paste this into a BLAST search page for me
CAAGGAGTCAGCCACTCTGGGAATTGGGTGTTGAATTCTGCAGCACTTATGAAGGCCATTTCTCATTGCTTGTATCATTGCTTGTATTGCTGTCATTGAAATTGTGCCTCACTTTTTTAATTTCATCAGTTTTCATTTACGTTTCGCACCTTTCGCACCTTTGTATTCGGTTCTTGAAAAACTGCCTTCACTTGTTCGCTTCACTTGTTCGCTGGCCATATATTTGGCCATATATTTTAATTCTCCTCCATAGATCGAATCCTTTAACCCCAAAGATTATCATATCGTACGTGCGCGCCTCTTCTCTTTGCCCAGAATTTCTATAAAGTGACTTGACTTCATTTCTTAAG

Full Affymetrix probeset data:

Annotations for 1628960_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720