FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628969_s_at:

>probe:Drosophila_2:1628969_s_at:346:349; Interrogation_Position=2613; Antisense; GCAGCCAAAGCAACGCTTCAACAAG
>probe:Drosophila_2:1628969_s_at:485:89; Interrogation_Position=2667; Antisense; AGTAGGAACTTCAATCACAATCACA
>probe:Drosophila_2:1628969_s_at:40:163; Interrogation_Position=2683; Antisense; ACAATCACAACCAGAGCATCATCCA
>probe:Drosophila_2:1628969_s_at:235:347; Interrogation_Position=2698; Antisense; GCATCATCCACATCAGTAGCCAGAA
>probe:Drosophila_2:1628969_s_at:658:419; Interrogation_Position=2781; Antisense; GAGCATATCGACTTGATTTTGGAGG
>probe:Drosophila_2:1628969_s_at:34:363; Interrogation_Position=2823; Antisense; GCAATACACGTTACCGGCTCTAAAT
>probe:Drosophila_2:1628969_s_at:120:573; Interrogation_Position=2838; Antisense; GGCTCTAAATGCTTTGTCACCATGA
>probe:Drosophila_2:1628969_s_at:335:649; Interrogation_Position=2854; Antisense; TCACCATGAAGAAAATCCGACGGCT
>probe:Drosophila_2:1628969_s_at:191:669; Interrogation_Position=2888; Antisense; TTTTCCCGTGATGAACTTCTCTTAA
>probe:Drosophila_2:1628969_s_at:8:475; Interrogation_Position=2921; Antisense; GTTACTTCTTTGCAAAGTGCATTCT
>probe:Drosophila_2:1628969_s_at:638:389; Interrogation_Position=2958; Antisense; GAAACTCGGTTAAGCGAACTACATA
>probe:Drosophila_2:1628969_s_at:666:493; Interrogation_Position=3076; Antisense; GTAATTGTTTTGTCTGTCGTCGTCA
>probe:Drosophila_2:1628969_s_at:355:499; Interrogation_Position=3087; Antisense; GTCTGTCGTCGTCATTACGCTTAAA
>probe:Drosophila_2:1628969_s_at:114:235; Interrogation_Position=3184; Antisense; AATGCCCATATGACAATTGACTAAA

Paste this into a BLAST search page for me
GCAGCCAAAGCAACGCTTCAACAAGAGTAGGAACTTCAATCACAATCACAACAATCACAACCAGAGCATCATCCAGCATCATCCACATCAGTAGCCAGAAGAGCATATCGACTTGATTTTGGAGGGCAATACACGTTACCGGCTCTAAATGGCTCTAAATGCTTTGTCACCATGATCACCATGAAGAAAATCCGACGGCTTTTTCCCGTGATGAACTTCTCTTAAGTTACTTCTTTGCAAAGTGCATTCTGAAACTCGGTTAAGCGAACTACATAGTAATTGTTTTGTCTGTCGTCGTCAGTCTGTCGTCGTCATTACGCTTAAAAATGCCCATATGACAATTGACTAAA

Full Affymetrix probeset data:

Annotations for 1628969_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720