FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628973_a_at:

>probe:Drosophila_2:1628973_a_at:296:29; Interrogation_Position=2258; Antisense; ATACGAAGTGCTATCTGCCTACGCG
>probe:Drosophila_2:1628973_a_at:94:501; Interrogation_Position=2303; Antisense; GTCGAGCTCTGCTGCTGATTCAAGC
>probe:Drosophila_2:1628973_a_at:564:329; Interrogation_Position=2337; Antisense; GCGTCCAGTGCCAGCGCTAATGTGA
>probe:Drosophila_2:1628973_a_at:67:153; Interrogation_Position=2366; Antisense; ACATCACACCATAGCCCAAGAATCA
>probe:Drosophila_2:1628973_a_at:261:513; Interrogation_Position=2402; Antisense; GTGTTCAAGCGCGAGCCACTTTGGA
>probe:Drosophila_2:1628973_a_at:655:311; Interrogation_Position=2416; Antisense; GCCACTTTGGAGTTGCTCACAGTTC
>probe:Drosophila_2:1628973_a_at:237:645; Interrogation_Position=2432; Antisense; TCACAGTTCTGGGTTTTCGTCCGAC
>probe:Drosophila_2:1628973_a_at:64:289; Interrogation_Position=2467; Antisense; CGGCTGTATCTTCGTATGCACATAT
>probe:Drosophila_2:1628973_a_at:94:57; Interrogation_Position=2490; Antisense; ATGAGCTACAATTACGCGTCGTCCG
>probe:Drosophila_2:1628973_a_at:155:35; Interrogation_Position=2549; Antisense; ATCAGCACACGTGGCCCCGGGAAAA
>probe:Drosophila_2:1628973_a_at:486:157; Interrogation_Position=2570; Antisense; AAAACAACAGTTCTTCGCCTCCTGT
>probe:Drosophila_2:1628973_a_at:486:697; Interrogation_Position=2594; Antisense; TTTCTACTCACCGTGGGTCTAGGAA
>probe:Drosophila_2:1628973_a_at:461:377; Interrogation_Position=2640; Antisense; GAAGCACTGCGAAAGGACTATTTAC
>probe:Drosophila_2:1628973_a_at:151:687; Interrogation_Position=2767; Antisense; TATAGTTCCGCCCATTAAATCCAAT

Paste this into a BLAST search page for me
ATACGAAGTGCTATCTGCCTACGCGGTCGAGCTCTGCTGCTGATTCAAGCGCGTCCAGTGCCAGCGCTAATGTGAACATCACACCATAGCCCAAGAATCAGTGTTCAAGCGCGAGCCACTTTGGAGCCACTTTGGAGTTGCTCACAGTTCTCACAGTTCTGGGTTTTCGTCCGACCGGCTGTATCTTCGTATGCACATATATGAGCTACAATTACGCGTCGTCCGATCAGCACACGTGGCCCCGGGAAAAAAAACAACAGTTCTTCGCCTCCTGTTTTCTACTCACCGTGGGTCTAGGAAGAAGCACTGCGAAAGGACTATTTACTATAGTTCCGCCCATTAAATCCAAT

Full Affymetrix probeset data:

Annotations for 1628973_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720