FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628980_s_at:

>probe:Drosophila_2:1628980_s_at:647:555; Interrogation_Position=1377; Antisense; GGAAAACCCCGATCTGTGTTGGCAG
>probe:Drosophila_2:1628980_s_at:219:287; Interrogation_Position=1390; Antisense; CTGTGTTGGCAGTCATTAGTTATTA
>probe:Drosophila_2:1628980_s_at:259:707; Interrogation_Position=1405; Antisense; TTAGTTATTAGACCAGCGACCGATC
>probe:Drosophila_2:1628980_s_at:152:123; Interrogation_Position=1419; Antisense; AGCGACCGATCAATCCACAGTGCAT
>probe:Drosophila_2:1628980_s_at:334:233; Interrogation_Position=1430; Antisense; AATCCACAGTGCATCTCATTTTTAG
>probe:Drosophila_2:1628980_s_at:277:367; Interrogation_Position=1454; Antisense; GAATCGTCAGGATCCATTTTAAAGA
>probe:Drosophila_2:1628980_s_at:701:83; Interrogation_Position=1499; Antisense; AGTGTCCGATTTGTTATCCGTTCGT
>probe:Drosophila_2:1628980_s_at:401:717; Interrogation_Position=1519; Antisense; TTCGTGCCTGTCCTGCAAGATATTT
>probe:Drosophila_2:1628980_s_at:56:299; Interrogation_Position=1574; Antisense; CGCTTTTGAGTTTTGTGTTGCCTAA
>probe:Drosophila_2:1628980_s_at:556:17; Interrogation_Position=1600; Antisense; ATTTAACCAATGCACTTTTTCTCAG
>probe:Drosophila_2:1628980_s_at:16:701; Interrogation_Position=1616; Antisense; TTTTCTCAGTTCTCGCCAAAGCGGA
>probe:Drosophila_2:1628980_s_at:137:279; Interrogation_Position=1627; Antisense; CTCGCCAAAGCGGAGGAAAGCGTTT
>probe:Drosophila_2:1628980_s_at:316:391; Interrogation_Position=1642; Antisense; GAAAGCGTTTTGTTGCCTGGCGTTA
>probe:Drosophila_2:1628980_s_at:530:399; Interrogation_Position=1831; Antisense; GACAGCAACTGCTAAACTGCGAAAT

Paste this into a BLAST search page for me
GGAAAACCCCGATCTGTGTTGGCAGCTGTGTTGGCAGTCATTAGTTATTATTAGTTATTAGACCAGCGACCGATCAGCGACCGATCAATCCACAGTGCATAATCCACAGTGCATCTCATTTTTAGGAATCGTCAGGATCCATTTTAAAGAAGTGTCCGATTTGTTATCCGTTCGTTTCGTGCCTGTCCTGCAAGATATTTCGCTTTTGAGTTTTGTGTTGCCTAAATTTAACCAATGCACTTTTTCTCAGTTTTCTCAGTTCTCGCCAAAGCGGACTCGCCAAAGCGGAGGAAAGCGTTTGAAAGCGTTTTGTTGCCTGGCGTTAGACAGCAACTGCTAAACTGCGAAAT

Full Affymetrix probeset data:

Annotations for 1628980_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720