FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1628985_a_at:

>probe:Drosophila_2:1628985_a_at:109:187; Interrogation_Position=3527; Antisense; AACAACCATTTGTATTTGCCTCTTA
>probe:Drosophila_2:1628985_a_at:578:19; Interrogation_Position=3540; Antisense; ATTTGCCTCTTATTTGTTTTCTGTT
>probe:Drosophila_2:1628985_a_at:113:237; Interrogation_Position=3595; Antisense; AATCGATTGTATTTGCCATTCCATG
>probe:Drosophila_2:1628985_a_at:516:721; Interrogation_Position=3607; Antisense; TTGCCATTCCATGCTCAATGTGTTA
>probe:Drosophila_2:1628985_a_at:499:713; Interrogation_Position=3667; Antisense; TTCAGCATTTAGTCAAAACAGCATT
>probe:Drosophila_2:1628985_a_at:137:201; Interrogation_Position=3693; Antisense; AACGCTTATGTAAATCTTGCACTTG
>probe:Drosophila_2:1628985_a_at:539:275; Interrogation_Position=3708; Antisense; CTTGCACTTGTTAGTGTCTAAGTTA
>probe:Drosophila_2:1628985_a_at:194:397; Interrogation_Position=3743; Antisense; GACAAATCGAAACTGAAGCACTCCA
>probe:Drosophila_2:1628985_a_at:171:375; Interrogation_Position=3757; Antisense; GAAGCACTCCAAATTGTTTTTACCT
>probe:Drosophila_2:1628985_a_at:222:459; Interrogation_Position=3785; Antisense; GATTATTTCCGGTAAGAGTCTTGTG
>probe:Drosophila_2:1628985_a_at:349:677; Interrogation_Position=3876; Antisense; TAGACACAAGGAGACACAACAGCAA
>probe:Drosophila_2:1628985_a_at:415:421; Interrogation_Position=3942; Antisense; GAGCAATTTCAAGTGTTTCAAGCCA
>probe:Drosophila_2:1628985_a_at:683:83; Interrogation_Position=4009; Antisense; AGTGGTGACGCAAAGTGCACGTTTT
>probe:Drosophila_2:1628985_a_at:74:257; Interrogation_Position=4088; Antisense; CACAACACTTACACACGGAGGAAAA

Paste this into a BLAST search page for me
AACAACCATTTGTATTTGCCTCTTAATTTGCCTCTTATTTGTTTTCTGTTAATCGATTGTATTTGCCATTCCATGTTGCCATTCCATGCTCAATGTGTTATTCAGCATTTAGTCAAAACAGCATTAACGCTTATGTAAATCTTGCACTTGCTTGCACTTGTTAGTGTCTAAGTTAGACAAATCGAAACTGAAGCACTCCAGAAGCACTCCAAATTGTTTTTACCTGATTATTTCCGGTAAGAGTCTTGTGTAGACACAAGGAGACACAACAGCAAGAGCAATTTCAAGTGTTTCAAGCCAAGTGGTGACGCAAAGTGCACGTTTTCACAACACTTACACACGGAGGAAAA

Full Affymetrix probeset data:

Annotations for 1628985_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720