FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629005_a_at:

>probe:Drosophila_2:1629005_a_at:563:581; Interrogation_Position=1462; Antisense; TGGCCGAGCGACTGAAGCAGCACGT
>probe:Drosophila_2:1629005_a_at:537:113; Interrogation_Position=1477; Antisense; AGCAGCACGTGTCTGATCCGAACAA
>probe:Drosophila_2:1629005_a_at:374:415; Interrogation_Position=1508; Antisense; GATCCTTATCTTCCCGGAGGGAACT
>probe:Drosophila_2:1629005_a_at:406:159; Interrogation_Position=1540; Antisense; ACAACACGTCGGTCATGCAGTTCAA
>probe:Drosophila_2:1629005_a_at:673:263; Interrogation_Position=1571; Antisense; CAGCTTCGAAGTTGGCGGCGTCATC
>probe:Drosophila_2:1629005_a_at:636:249; Interrogation_Position=1595; Antisense; CTACCCGGTGGCCATTAAGTACGAT
>probe:Drosophila_2:1629005_a_at:499:411; Interrogation_Position=1632; Antisense; GACGCCTTCTGGAACAGCGCGAAGT
>probe:Drosophila_2:1629005_a_at:663:151; Interrogation_Position=1678; Antisense; ACATGATGATGACCTCGTGGGCCAT
>probe:Drosophila_2:1629005_a_at:628:41; Interrogation_Position=1701; Antisense; ATCGTGTGCGATGTGTGGTACCTGC
>probe:Drosophila_2:1629005_a_at:107:415; Interrogation_Position=1747; Antisense; GAGAGTCGGCGATCGACTTCGCGAA
>probe:Drosophila_2:1629005_a_at:86:635; Interrogation_Position=1765; Antisense; TCGCGAACCGCGTGAAGAGTGTCAT
>probe:Drosophila_2:1629005_a_at:310:433; Interrogation_Position=1862; Antisense; GAGGGAGATCCAGCAAGTCGAGTTT
>probe:Drosophila_2:1629005_a_at:720:719; Interrogation_Position=1885; Antisense; TTGCCAATCGGCTGAAGTCGGACTC
>probe:Drosophila_2:1629005_a_at:366:639; Interrogation_Position=1902; Antisense; TCGGACTCCACCTAAATTACCATAT

Paste this into a BLAST search page for me
TGGCCGAGCGACTGAAGCAGCACGTAGCAGCACGTGTCTGATCCGAACAAGATCCTTATCTTCCCGGAGGGAACTACAACACGTCGGTCATGCAGTTCAACAGCTTCGAAGTTGGCGGCGTCATCCTACCCGGTGGCCATTAAGTACGATGACGCCTTCTGGAACAGCGCGAAGTACATGATGATGACCTCGTGGGCCATATCGTGTGCGATGTGTGGTACCTGCGAGAGTCGGCGATCGACTTCGCGAATCGCGAACCGCGTGAAGAGTGTCATGAGGGAGATCCAGCAAGTCGAGTTTTTGCCAATCGGCTGAAGTCGGACTCTCGGACTCCACCTAAATTACCATAT

Full Affymetrix probeset data:

Annotations for 1629005_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720