FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629013_at:

>probe:Drosophila_2:1629013_at:64:391; Interrogation_Position=1411; Antisense; GAAACAGTTCAATTTGGAGCAGCTT
>probe:Drosophila_2:1629013_at:17:21; Interrogation_Position=1422; Antisense; ATTTGGAGCAGCTTAAGGCGGCCAA
>probe:Drosophila_2:1629013_at:457:251; Interrogation_Position=1444; Antisense; CAAGGCCCAAATGCCTGCGAAGGCG
>probe:Drosophila_2:1629013_at:198:371; Interrogation_Position=1462; Antisense; GAAGGCGACAAAGGCTACATAGTAA
>probe:Drosophila_2:1629013_at:396:189; Interrogation_Position=1501; Antisense; AACAGATGGACTGGCACATTCCCTT
>probe:Drosophila_2:1629013_at:559:269; Interrogation_Position=1517; Antisense; CATTCCCTTCACAAAGCAACCAAAT
>probe:Drosophila_2:1629013_at:627:115; Interrogation_Position=1559; Antisense; AGCTTGTACGATTAATCTGTTCTTA
>probe:Drosophila_2:1629013_at:362:477; Interrogation_Position=1661; Antisense; GTTTTATCAGGCTTTATACACGGAA
>probe:Drosophila_2:1629013_at:290:549; Interrogation_Position=1696; Antisense; GGAGGAGGTTCTTTCGATGCATAAT
>probe:Drosophila_2:1629013_at:729:29; Interrogation_Position=1719; Antisense; ATACAGCATCGTTATGTCACTTTAA
>probe:Drosophila_2:1629013_at:408:253; Interrogation_Position=1773; Antisense; CAACGACTTTTTCACATTCGATAAG
>probe:Drosophila_2:1629013_at:391:477; Interrogation_Position=1836; Antisense; GTTTATTTCTGTTTTCAGACAGCTT
>probe:Drosophila_2:1629013_at:255:687; Interrogation_Position=1887; Antisense; TATATTTGTCCAAAACCTCCTACCT
>probe:Drosophila_2:1629013_at:221:685; Interrogation_Position=1951; Antisense; TATTTACCACTAGTTTTACATTCAG

Paste this into a BLAST search page for me
GAAACAGTTCAATTTGGAGCAGCTTATTTGGAGCAGCTTAAGGCGGCCAACAAGGCCCAAATGCCTGCGAAGGCGGAAGGCGACAAAGGCTACATAGTAAAACAGATGGACTGGCACATTCCCTTCATTCCCTTCACAAAGCAACCAAATAGCTTGTACGATTAATCTGTTCTTAGTTTTATCAGGCTTTATACACGGAAGGAGGAGGTTCTTTCGATGCATAATATACAGCATCGTTATGTCACTTTAACAACGACTTTTTCACATTCGATAAGGTTTATTTCTGTTTTCAGACAGCTTTATATTTGTCCAAAACCTCCTACCTTATTTACCACTAGTTTTACATTCAG

Full Affymetrix probeset data:

Annotations for 1629013_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720