FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629023_s_at:

>probe:Drosophila_2:1629023_s_at:126:497; Interrogation_Position=1006; Antisense; GTCAGGTATCCGTTTCAAATGCATT
>probe:Drosophila_2:1629023_s_at:273:233; Interrogation_Position=1023; Antisense; AATGCATTAGAGTCCACACCTTTTA
>probe:Drosophila_2:1629023_s_at:725:503; Interrogation_Position=1053; Antisense; GTCCAAGTATCCTCACTTTTACGTA
>probe:Drosophila_2:1629023_s_at:383:283; Interrogation_Position=1124; Antisense; CTGCGCCAGGGCAAGACTGAATAAA
>probe:Drosophila_2:1629023_s_at:238:615; Interrogation_Position=1151; Antisense; TGAATATAAGCATCCGCGCCATCAA
>probe:Drosophila_2:1629023_s_at:231:239; Interrogation_Position=1174; Antisense; AATCAGTACCTACGCTTTCATTCAT
>probe:Drosophila_2:1629023_s_at:397:697; Interrogation_Position=1189; Antisense; TTTCATTCATAAGCACCTGTCCACA
>probe:Drosophila_2:1629023_s_at:269:111; Interrogation_Position=1200; Antisense; AGCACCTGTCCACAACTTGATTTAT
>probe:Drosophila_2:1629023_s_at:242:231; Interrogation_Position=1347; Antisense; AATGATTCCGTTATTTGGCAAGCCA
>probe:Drosophila_2:1629023_s_at:60:729; Interrogation_Position=1361; Antisense; TTGGCAAGCCAACACCGAAGCAATG
>probe:Drosophila_2:1629023_s_at:128:215; Interrogation_Position=940; Antisense; AAGTTCCCGGTACGTTATGGCATCG
>probe:Drosophila_2:1629023_s_at:582:41; Interrogation_Position=961; Antisense; ATCGGGATGTGGAAACTGCCTCAGA
>probe:Drosophila_2:1629023_s_at:689:281; Interrogation_Position=976; Antisense; CTGCCTCAGATTTCACCATGACAAT
>probe:Drosophila_2:1629023_s_at:603:159; Interrogation_Position=996; Antisense; ACAATTAGCAGTCAGGTATCCGTTT

Paste this into a BLAST search page for me
GTCAGGTATCCGTTTCAAATGCATTAATGCATTAGAGTCCACACCTTTTAGTCCAAGTATCCTCACTTTTACGTACTGCGCCAGGGCAAGACTGAATAAATGAATATAAGCATCCGCGCCATCAAAATCAGTACCTACGCTTTCATTCATTTTCATTCATAAGCACCTGTCCACAAGCACCTGTCCACAACTTGATTTATAATGATTCCGTTATTTGGCAAGCCATTGGCAAGCCAACACCGAAGCAATGAAGTTCCCGGTACGTTATGGCATCGATCGGGATGTGGAAACTGCCTCAGACTGCCTCAGATTTCACCATGACAATACAATTAGCAGTCAGGTATCCGTTT

Full Affymetrix probeset data:

Annotations for 1629023_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720