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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1629030_a_at:

>probe:Drosophila_2:1629030_a_at:230:401; Interrogation_Position=3102; Antisense; GACTTCGAGCTGCTCCGCAAGTACG
>probe:Drosophila_2:1629030_a_at:509:295; Interrogation_Position=3117; Antisense; CGCAAGTACGGCCTGGACCAGTTCA
>probe:Drosophila_2:1629030_a_at:569:473; Interrogation_Position=3137; Antisense; GTTCACCCTGAACGCCAACGGAACG
>probe:Drosophila_2:1629030_a_at:477:383; Interrogation_Position=3157; Antisense; GAACGGAGAAGTCGCAGCAGCTCAC
>probe:Drosophila_2:1629030_a_at:442:117; Interrogation_Position=3175; Antisense; AGCTCACCACCGGAAAGGGCATGAA
>probe:Drosophila_2:1629030_a_at:155:387; Interrogation_Position=3197; Antisense; GAACAACTGGACAACATTCGATTGA
>probe:Drosophila_2:1629030_a_at:101:717; Interrogation_Position=3213; Antisense; TTCGATTGAAGGGACACAGCTGGTC
>probe:Drosophila_2:1629030_a_at:662:153; Interrogation_Position=3228; Antisense; ACAGCTGGTCAGATAACCTGCATCA
>probe:Drosophila_2:1629030_a_at:238:417; Interrogation_Position=3331; Antisense; GAGCGATGACAGTAAAATAACCCCT
>probe:Drosophila_2:1629030_a_at:11:135; Interrogation_Position=3360; Antisense; ACCCAAAATTGTGTGTCTGCAGTAG
>probe:Drosophila_2:1629030_a_at:579:475; Interrogation_Position=3396; Antisense; GTTATACTTAAGCAGAGGATCCAAT
>probe:Drosophila_2:1629030_a_at:613:347; Interrogation_Position=3471; Antisense; GCATGAATCGGAACTCTCGCTAACT
>probe:Drosophila_2:1629030_a_at:643:641; Interrogation_Position=3485; Antisense; TCTCGCTAACTACGCATACTTACAT
>probe:Drosophila_2:1629030_a_at:131:29; Interrogation_Position=3508; Antisense; ATACATATTGTACGCTGGACTTCCA

Paste this into a BLAST search page for me
GACTTCGAGCTGCTCCGCAAGTACGCGCAAGTACGGCCTGGACCAGTTCAGTTCACCCTGAACGCCAACGGAACGGAACGGAGAAGTCGCAGCAGCTCACAGCTCACCACCGGAAAGGGCATGAAGAACAACTGGACAACATTCGATTGATTCGATTGAAGGGACACAGCTGGTCACAGCTGGTCAGATAACCTGCATCAGAGCGATGACAGTAAAATAACCCCTACCCAAAATTGTGTGTCTGCAGTAGGTTATACTTAAGCAGAGGATCCAATGCATGAATCGGAACTCTCGCTAACTTCTCGCTAACTACGCATACTTACATATACATATTGTACGCTGGACTTCCA

Full Affymetrix probeset data:

Annotations for 1629030_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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